myRT

myRT report for GCA_900457165.1_57428_G02

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Seq: UGYQ01000002.1 Shigella flexneri strain NCTC8520 genome assembly, contig: ERS1869789SCcontig000002, whole genome shotgun sequence (163656 bp)
Overview 1 RT 1: 86117-89444 bp Neighborhood of RT #1 [86117, 89458] PHA02517 DDE_Tnp_IS66 RVT-GII GIIM DDE_Tnp_IS66_C COG3547 Feature: gene Location: 86117-86764 bp Feature: domain Description: PHA02517 Location: 86120-86762 bp Feature: domain Description: PHA0251 7 Location: 861 20-86762 bp Feature: gene Location: 86858-86989 bp Feature: domain Description: DDE_Tnp_IS66 Location: 86870-86963 bp Feature: domain Description: DDE_Tnp_IS66 Location: 86870-86963 bp Feature: gene Location: 87551-88684 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 87653-88307 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 87653-88307 bp Feature: domain Description: GIIM Note: maturase Location: 88385-88607 bp Feature: domain Description: GIIM Note: maturase Location: 88385-88607 bp Feature: gene Location: 88800-88946 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 88812-88923 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 8881 2-88923 bp Feature: gene Location: 88973-89458 bp Feature: domain Description: COG3547 Location: 88991-89444 bp Feature: domain Description: COG3547 Location: 88991 -89444 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), DDE_Tnp_IS66 (pfam03050), RVT-GII, GIIM (pfam08388), DDE_Tnp_IS66_C (pfam13817), COG3547 (Transposase )