myRT

myRT report for GCA_900457185.1_57428_H02

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Seq: UGYR01000002.1 Shigella flexneri strain NCTC8524 genome assembly, contig: ERS1869790SCcontig000002, whole genome shotgun sequence (136709 bp)
Overview 1 RT 1: 2030-4731 bp 2 RT 2: 91677-94327 bp Neighborhood of RT #1 [2030, 4751] GIIM RVT-GII Tra5 PAP2_acid_phosphatase Neighborhood of RT #2 [91677, 94327] COG3547 RVT-GII GIIM Feature: gene Location: 2030-2185 bp Feature: gene Location: 2211-2582 bp Feature: domain Description: GIIM Note: maturase Location: 2289-2508 bp Feature: domain Description: GIIM Note: maturase Location: 2289-2508 bp Feature: gene Location: 2590-3393 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2890-3385 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2890-3385 bp Feature: gene Location: 3406-3606 bp Feature: domain Description: Tra5 Location: 3415-3589 bp Feature: domain Description: Tra5 Location: 341 5-3589 bp Feature: gene Location: 4002-4751 bp Feature: domain Description: PAP2_acid_phosphatase Location: 4077-4731 bp Feature: domain Description: PAP2_acid_phosphatase Location: 4077-4731 bp Feature: gene Location: 91677-92042 bp Feature: domain Description: COG3547 Location: 91695-92004 bp Feature: domain Description: COG3547 Location: 91 695-92004 bp Feature: gene Location: 92254-92421 bp Feature: gene Location: 92447-93664 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 92633-93287 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 92633-93287 bp Feature: domain Description: GIIM Note: maturase Location: 93365-93587 bp Feature: domain Description: GIIM Note: maturase Location: 93365-93587 bp Feature: gene Location: 93675-94094 bp Feature: gene Location: 94133-94327 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT GIIM (pfam08388), RVT-GII, Tra5 (COG2801), PAP2_acid_phosphatase (cd03397), COG3547 (Transposase )