myRT

myRT report for GCA_900457215.1_57940_E01

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Seq: UAUQ01000015.1 Shigella dysenteriae strain NCTC4837 genome assembly, contig: ERS1906609SCcontig000015, whole genome shotgun sequence (187826 bp)
Overview 1 RT 1: 173208-175861 bp Neighborhood of RT #1 [173208, 175861] COG3547 RVT-GII GIIM Feature: gene Location: 173208-173693 bp Feature: domain Description: COG3547 Location: 173226-173679 bp Feature: domain Description: COG3547 Location: 1 73226-1 73679 bp Feature: gene Location: 173789-173956 bp Feature: gene Location: 173982-175214 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 174183-174837 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 741 83-1 74837 bp Feature: domain Description: GIIM Note: maturase Location: 174915-175137 bp Feature: domain Description: GIIM Note: maturase Location: 1 7491 5-1 751 37 bp Feature: gene Location: 175209-175613 bp Feature: gene Location: 175610-175861 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG3547 (Transposase ), RVT-GII, GIIM (pfam08388)

Seq: UAUQ01000003.1 Shigella dysenteriae strain NCTC4837 genome assembly, contig: ERS1906609SCcontig000003, whole genome shotgun sequence (1659164 bp)
Overview 1 RT 1: 945978-948508 bp Neighborhood of RT #1 [945978, 948522] pyrE RVT-Retrons slmA Feature: gene Location: 945978-946634 bp Feature: domain Description: pyrE Location: 945996-946629 bp Feature: domain Description: pyrE Location: 945996-94662 9 bp Feature: gene Location: 946767-947045 bp Feature: gene Location: 947088-947597 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 947094-947589 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 947094-947589 bp Feature: gene Location: 947683-947880 bp Feature: gene Location: 947926-948522 bp Feature: domain Description: slmA Location: 947932-948508 bp Feature: domain Description: slmA Location: 947932 -948508 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT pyrE (TIGR00336), RVT-Retrons, slmA (PRK09480)