myRT

myRT report for GCA_900459055.1_43908_A01

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Seq: UHEQ01000004.1 Streptococcus agalactiae strain NCTC8185 genome assembly, contig: ERS1037085SCcontig000004, whole genome shotgun sequence (2252629 bp)
Overview 1 RT 1: 133977-141350 bp 2 RT 2: 198722-202593 bp 3 RT 3: 258760-266717 bp 4 RT 4: 357517-361645 bp 5 RT 5: 602710-607240 bp 6 RT 6: 677569-682650 bp 7 RT 7: 992877-1003165 bp 8 RT 8: 1089615-1096966 bp 9 RT 9: 1101752-1110393 bp 10 RT 10: 1140016-1147569 bp 11 RT 11: 1226705-1237090 bp 12 RT 12: 1311687-1320204 bp 13 RT 13: 1364010-1371008 bp 14 RT 14: 1442535-1445872 bp 15 RT 15: 1616354-1623769 bp 16 RT 16: 1632493-1642018 bp 17 RT 17: 1803383-1809423 bp 18 RT 18: 1923454-1928369 bp 19 RT 19: 1982267-1987344 bp 20 RT 20: 2023380-2028380 bp 21 RT 21: 2152449-2158708 bp Neighborhood of RT #1 [133977, 141358] PRK05764 PRK07246 RVT-GII GIIM PRK08643 TTHA1623-like_MBL-fold Neighborhood of RT #2 [198722, 202601] RHOD ROK_glcA_fam RVT_N RVT-GII GIIM ROK_glcA_fam YqgQ Neighborhood of RT #3 [258760, 266722] Transposase_mut Peptidases_S8_C5a_Peptidase fn3_5 CHU_C RVT_N RVT-GII GIIM ElaA Neighborhood of RT #4 [357517, 361683] CelA RVT_N RVT-GII GIIM CelC DeoR Neighborhood of RT #5 [602710, 607251] PhoE PRK08295 RVT-GII GIIM DUF2992 NTP_transf_6 Neighborhood of RT #6 [677569, 682682] AXE1 NagC RVT_N RVT-GII GIIM NagC NAL Neighborhood of RT #7 [992877, 1003176] RseP PRK09194 RVT-GII GIIM PRK08581 polC Neighborhood of RT #8 [1089615, 1097025] TraC-F-type RVT_N RVT-GII GIIM TraC-F-type Peptidase_M23 Phage_lysozyme2 PRK08581 Neighborhood of RT #9 [1101752, 1110737] PRK07726 RVT_N RVT-GII GIIM DUF3991 Toprim_2 PBECR4 Peptidase_M78 Neighborhood of RT #10 [1140016, 1147574] PRK12739 GapA RVT-GII GIIM lipo_e_P4 Pgk Neighborhood of RT #11 [1226705, 1237113] Trep_Strep CbiQ RVT_N RVT-GII GIIM EcfT ABC_cobalt_CbiO_domain1 ABC_cobalt_CbiO_domain1 MdlB RVT_N RVT-GII GIIM ABCC_MsbA MdlB Neighborhood of RT #12 [1311687, 1320230] Der HepA RVT-GII GIIM MurC Neighborhood of RT #13 [1364010, 1371235] PRK12267 Branch_AA_trans RVT-GII GIIM PolyPPase_VTC_like DUF4956 Neighborhood of RT #14 [1442535, 1445883] RVT-GII GIIM GlnQ Neighborhood of RT #15 [1616354, 1623807] TraC-F-type RVT_N RVT-GII GIIM TraC-F-type Peptidase_M23 Phage_lysozyme2 PRK08581 Neighborhood of RT #16 [1632493, 1642018] N6_Mtase COG4646 KOG0390 RVT_N RVT-GII GIIM Neighborhood of RT #17 [1803383, 1809425] Cof PRK10416 RVT-GII GIIM YcgQ YraQ Neighborhood of RT #18 [1923454, 1928377] ThiW ABC_cobalt RVT-GII GIIM EcfA2 EcfA2 EcfT Neighborhood of RT #19 [1982267, 1987349] lipoyltrans RVT-GII GIIM COG3442 MurE Neighborhood of RT #20 [2023380, 2028382] sigpep_I_bact RVT-GII GIIM PRK00331 PRK10220 Neighborhood of RT #21 [2152449, 2158713] COG4684 PGM2 RVT-GII GIIM MdlB Feature: gene Location: 133977-135170 bp Feature: domain Description: PRK05764 Location: 133983-135156 bp Feature: domain Description: PRK05764 Location: 1 33983-1 351 56 bp Feature: gene Location: 135256-137721 bp Feature: domain Description: PRK07246 Location: 135259-137719 bp Feature: domain Description: PRK07246 Location: 1 35259-1 3771 9 bp Feature: gene Location: 137888-139165 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 138092-138707 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 38092-1 38707 bp Feature: domain Description: GIIM Note: maturase Location: 138761-138977 bp Feature: domain Description: GIIM Note: maturase Location: 1 38761 -1 38977 bp Feature: gene Location: 139728-140501 bp Feature: domain Description: PRK08643 Location: 139740-140499 bp Feature: domain Description: PRK08643 Location: 1 39740-1 40499 bp Feature: gene Location: 140723-141358 bp Feature: domain Description: TTHA1623-like_MBL-fold Location: 140759-141350 bp Feature: domain Description: TTHA1 623-like_MBL-fold Location: 1 40759-1 41 350 bp Feature: gene Location: 198722-199102 bp Feature: domain Description: RHOD Location: 198851-199085 bp Feature: domain Description: RHOD Location: 1 98851 -1 99085 bp Feature: gene Location: 199114-199713 bp Feature: domain Description: ROK_glcA_fam Location: 199270-199702 bp Feature: domain Description: ROK_glcA_fam Location: 1 99270-1 99702 bp Feature: gene Location: 199646-201343 bp Feature: RT Description: RVT_N Location: 199742-199982 bp Feature: RT Description: RVT_N Location: 1 99742-1 99982 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 200030-200690 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 200030-200690 bp Feature: domain Description: GIIM Note: maturase Location: 200759-200978 bp Feature: domain Description: GIIM Note: maturase Location: 200759-200978 bp Feature: gene Location: 201853-202395 bp Feature: domain Description: ROK_glcA_fam Location: 201871-202378 bp Feature: domain Description: ROK_glcA_fam Location: 201 871 -202378 bp Feature: gene Location: 202392-202601 bp Feature: domain Description: YqgQ Location: 202395-202593 bp Feature: domain Description: YqgQ Location: 202395-202593 bp Feature: gene Location: 258760-259935 bp Feature: domain Description: Transposase_mut Location: 258781-259870 bp Feature: domain Description: Transposase_mut Location: 258781 -259870 bp Feature: gene Location: 260093-263614 bp Feature: domain Description: Peptidases_S8_C5a_Peptidase Location: 260420-261863 bp Feature: domain Description: Peptidases_S8_C5a_Peptidase Location: 260420-261 863 bp Feature: domain Description: fn3_5 Location: 261905-262235 bp Feature: domain Description: fn3_5 Location: 261 905-262235 bp Feature: domain Description: CHU_C Location: 262568-262847 bp Feature: domain Description: CHU_C Location: 262568-262847 bp Feature: gene Location: 263547-265244 bp Feature: RT Description: RVT_N Location: 263643-263883 bp Feature: RT Description: RVT_N Location: 263643-263883 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 263931-264591 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 263931 -264591 bp Feature: domain Description: GIIM Note: maturase Location: 264660-264879 bp Feature: domain Description: GIIM Note: maturase Location: 264660-264879 bp Feature: gene Location: 265754-266107 bp Feature: gene Location: 266294-266722 bp Feature: domain Description: ElaA Location: 266300-266717 bp Feature: domain Description: ElaA Location: 266300-26671 7 bp Feature: gene Location: 357517-357837 bp Feature: domain Description: CelA Location: 357520-357817 bp Feature: domain Description: CelA Location: 357520-35781 7 bp Feature: gene Location: 357944-358108 bp Feature: gene Location: 358479-360176 bp Feature: RT Description: RVT_N Location: 358575-358815 bp Feature: RT Description: RVT_N Location: 358575-35881 5 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 358863-359523 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 358863-359523 bp Feature: domain Description: GIIM Note: maturase Location: 359592-359811 bp Feature: domain Description: GIIM Note: maturase Location: 359592-35981 1 bp Feature: gene Location: 360248-360490 bp Feature: domain Description: CelC Location: 360266-360476 bp Feature: domain Description: CelC Location: 360266-360476 bp Feature: gene Location: 360694-361683 bp Feature: domain Description: DeoR Location: 360703-361645 bp Feature: domain Description: DeoR Location: 360703-361 645 bp Feature: gene Location: 602710-603402 bp Feature: domain Description: PhoE Location: 602719-603379 bp Feature: domain Description: PhoE Location: 60271 9-603379 bp Feature: gene Location: 603525-604004 bp Feature: domain Description: PRK08295 Location: 603537-603765 bp Feature: domain Description: PRK08295 Location: 603537-603765 bp Feature: gene Location: 604220-605497 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 604424-605039 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 604424-605039 bp Feature: domain Description: GIIM Note: maturase Location: 605093-605309 bp Feature: domain Description: GIIM Note: maturase Location: 605093-605309 bp Feature: gene Location: 606061-606480 bp Feature: domain Description: DUF2992 Location: 606070-606478 bp Feature: domain Description: DUF2992 Location: 606070-606478 bp Feature: gene Location: 606700-607251 bp Feature: domain Description: NTP_transf_6 Location: 606760-607240 bp Feature: domain Description: NTP_transf_6 Location: 606760-607240 bp Feature: gene Location: 677569-678546 bp Feature: domain Description: AXE1 Location: 677581-678499 bp Feature: domain Description: AXE1 Location: 677581 -678499 bp Feature: gene Location: 678554-679363 bp Feature: domain Description: NagC Location: 678728-679355 bp Feature: domain Description: NagC Location: 678728-679355 bp Feature: gene Location: 679296-680993 bp Feature: RT Description: RVT_N Location: 679392-679632 bp Feature: RT Description: RVT_N Location: 679392-679632 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 679680-680340 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 679680-680340 bp Feature: domain Description: GIIM Note: maturase Location: 680409-680628 bp Feature: domain Description: GIIM Note: maturase Location: 680409-680628 bp Feature: gene Location: 681503-681748 bp Feature: domain Description: NagC Location: 681506-681731 bp Feature: domain Description: NagC Location: 681 506-681 731 bp Feature: gene Location: 681765-682682 bp Feature: domain Description: NAL Location: 681786-682650 bp Feature: domain Description: NAL Location: 681 786-682650 bp Feature: gene Location: 992877-994136 bp Feature: domain Description: RseP Location: 992880-994131 bp Feature: domain Description: RseP Location: 992880-9941 31 bp Feature: gene Location: 994228-996081 bp Feature: domain Description: PRK09194 Location: 994231-996064 bp Feature: domain Description: PRK091 94 Location: 994231 -996064 bp Feature: gene Location: 996603-997913 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 996840-997455 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 996840-997455 bp Feature: domain Description: GIIM Note: maturase Location: 997509-997725 bp Feature: domain Description: GIIM Note: maturase Location: 997509-997725 bp Feature: gene Location: 998063-998647 bp Feature: domain Description: PRK08581 Location: 998174-998645 bp Feature: domain Description: PRK08581 Location: 9981 74-998645 bp Feature: gene Location: 998770-1003176 bp Feature: domain Description: polC Location: 998773-1003165 bp Feature: domain Description: polC Location: 998773-1 0031 65 bp Feature: gene Location: 1089615-1091129 bp Feature: domain Description: TraC-F-type Location: 1089972-1091037 bp Feature: domain Description: TraC-F-type Location: 1 089972-1 091 037 bp Feature: gene Location: 1091074-1091268 bp Feature: gene Location: 1091639-1093336 bp Feature: RT Description: RVT_N Location: 1091735-1091975 bp Feature: RT Description: RVT_N Location: 1 091 735-1 091 975 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1092023-1092683 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 092023-1 092683 bp Feature: domain Description: GIIM Note: maturase Location: 1092752-1092971 bp Feature: domain Description: GIIM Note: maturase Location: 1 092752-1 092971 bp Feature: gene Location: 1093269-1094318 bp Feature: domain Description: TraC-F-type Location: 1093443-1094154 bp Feature: domain Description: TraC-F-type Location: 1 093443-1 0941 54 bp Feature: gene Location: 1094362-1097025 bp Feature: domain Description: Peptidase_M23 Location: 1095598-1095805 bp Feature: domain Description: Peptidase_M23 Location: 1 095598-1 095805 bp Feature: domain Description: Phage_lysozyme2 Location: 1096036-1096555 bp Feature: domain Description: Phage_lysozyme2 Location: 1 096036-1 096555 bp Feature: domain Description: PRK08581 Location: 1096669-1096966 bp Feature: domain Description: PRK08581 Location: 1 096669-1 096966 bp Feature: gene Location: 1101752-1101895 bp Feature: gene Location: 1101950-1103533 bp Feature: domain Description: PRK07726 Location: 1101959-1103519 bp Feature: domain Description: PRK07726 Location: 1 1 01 959-1 1 0351 9 bp Feature: gene Location: 1103605-1105302 bp Feature: RT Description: RVT_N Location: 1103701-1103941 bp Feature: RT Description: RVT_N Location: 1 1 03701 -1 1 03941 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1103989-1104649 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 1 03989-1 1 04649 bp Feature: domain Description: GIIM Note: maturase Location: 1104718-1104937 bp Feature: domain Description: GIIM Note: maturase Location: 1 1 0471 8-1 1 04937 bp Feature: gene Location: 1106000-1106404 bp Feature: gene Location: 1106418-1110737 bp Feature: domain Description: DUF3991 Location: 1106811-1107045 bp Feature: domain Description: DUF3991 Location: 1 1 0681 1 -1 1 07045 bp Feature: domain Description: Toprim_2 Location: 1107093-1107456 bp Feature: domain Description: Toprim_2 Location: 1 1 07093-1 1 07456 bp Feature: domain Description: PBECR4 Location: 1108626-1109160 bp Feature: domain Description: PBECR4 Location: 1 1 08626-1 1 091 60 bp Feature: domain Description: Peptidase_M78 Location: 1110168-1110393 bp Feature: domain Description: Peptidase_M78 Location: 1 1 1 01 68-1 1 1 0393 bp Feature: gene Location: 1140016-1142094 bp Feature: domain Description: PRK12739 Location: 1140025-1142089 bp Feature: domain Description: PRK1 2739 Location: 1 1 40025-1 1 42089 bp Feature: gene Location: 1142298-1143308 bp Feature: domain Description: GapA Location: 1142307-1143300 bp Feature: domain Description: GapA Location: 1 1 42307-1 1 43300 bp Feature: gene Location: 1143840-1145150 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1144077-1144692 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 1 44077-1 1 44692 bp Feature: domain Description: GIIM Note: maturase Location: 1144746-1144962 bp Feature: domain Description: GIIM Note: maturase Location: 1 1 44746-1 1 44962 bp Feature: gene Location: 1145374-1146243 bp Feature: domain Description: lipo_e_P4 Location: 1145377-1146238 bp Feature: domain Description: lipo_e_P4 Location: 1 1 45377-1 1 46238 bp Feature: gene Location: 1146378-1147574 bp Feature: domain Description: Pgk Location: 1146384-1147569 bp Feature: domain Description: Pgk Location: 1 1 46384-1 1 47569 bp Feature: gene Location: 1226705-1226959 bp Feature: domain Description: Trep_Strep Location: 1226735-1226948 bp Feature: domain Description: Trep_Strep Location: 1 226735-1 226948 bp Feature: gene Location: 1227004-1227414 bp Feature: domain Description: CbiQ Location: 1227022-1227379 bp Feature: domain Description: CbiQ Location: 1 227022-1 227379 bp Feature: gene Location: 1227486-1229183 bp Feature: RT Description: RVT_N Location: 1227582-1227822 bp Feature: RT Description: RVT_N Location: 1 227582-1 227822 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1227870-1228530 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 227870-1 228530 bp Feature: domain Description: GIIM Note: maturase Location: 1228599-1228818 bp Feature: domain Description: GIIM Note: maturase Location: 1 228599-1 22881 8 bp Feature: gene Location: 1229763-1229939 bp Feature: domain Description: EcfT Location: 1229772-1229919 bp Feature: domain Description: EcfT Location: 1 229772-1 22991 9 bp Feature: gene Location: 1229932-1231311 bp Feature: domain Description: ABC_cobalt_CbiO_domain1 Location: 1229941-1230586 bp Feature: domain Description: ABC_cobalt_CbiO_domain1 Location: 1 229941 -1 230586 bp Feature: domain Description: ABC_cobalt_CbiO_domain1 Location: 1230733-1231306 bp Feature: domain Description: ABC_cobalt_CbiO_domain1 Location: 1 230733-1 231 306 bp Feature: gene Location: 1231332-1232879 bp Feature: domain Description: MdlB Location: 1231338-1232859 bp Feature: domain Description: MdlB Location: 1 231 338-1 232859 bp Feature: gene Location: 1232884-1233018 bp Feature: gene Location: 1233389-1235086 bp Feature: RT Description: RVT_N Location: 1233485-1233725 bp Feature: RT Description: RVT_N Location: 1 233485-1 233725 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1233773-1234433 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 233773-1 234433 bp Feature: domain Description: GIIM Note: maturase Location: 1234502-1234721 bp Feature: domain Description: GIIM Note: maturase Location: 1 234502-1 234721 bp Feature: gene Location: 1235019-1235402 bp Feature: domain Description: ABCC_MsbA Location: 1235139-1235337 bp Feature: domain Description: ABCC_MsbA Location: 1 2351 39-1 235337 bp Feature: gene Location: 1235392-1237113 bp Feature: domain Description: MdlB Location: 1235443-1237090 bp Feature: domain Description: MdlB Location: 1 235443-1 237090 bp Feature: gene Location: 1311687-1312997 bp Feature: domain Description: Der Location: 1311690-1312995 bp Feature: domain Description: Der Location: 1 31 1 690-1 31 2995 bp Feature: gene Location: 1313152-1316250 bp Feature: domain Description: HepA Location: 1314709-1316242 bp Feature: domain Description: HepA Location: 1 31 4709-1 31 6242 bp Feature: gene Location: 1316790-1318100 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1317027-1317642 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 31 7027-1 31 7642 bp Feature: domain Description: GIIM Note: maturase Location: 1317696-1317912 bp Feature: domain Description: GIIM Note: maturase Location: 1 31 7696-1 31 791 2 bp Feature: gene Location: 1318272-1318889 bp Feature: gene Location: 1318899-1320230 bp Feature: domain Description: MurC Location: 1318908-1320204 bp Feature: domain Description: MurC Location: 1 31 8908-1 320204 bp Feature: gene Location: 1364010-1366058 bp Feature: domain Description: PRK12267 Location: 1364070-1366053 bp Feature: domain Description: PRK1 2267 Location: 1 364070-1 366053 bp Feature: gene Location: 1366253-1367590 bp Feature: domain Description: Branch_AA_trans Location: 1366262-1367546 bp Feature: domain Description: Branch_AA_trans Location: 1 366262-1 367546 bp Feature: gene Location: 1368134-1369444 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1368371-1368986 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 368371 -1 368986 bp Feature: domain Description: GIIM Note: maturase Location: 1369040-1369256 bp Feature: domain Description: GIIM Note: maturase Location: 1 369040-1 369256 bp Feature: gene Location: 1369811-1370506 bp Feature: domain Description: PolyPPase_VTC_like Location: 1369829-1370471 bp Feature: domain Description: PolyPPase_VTC_like Location: 1 369829-1 370471 bp Feature: gene Location: 1370558-1371235 bp Feature: domain Description: DUF4956 Location: 1370645-1371008 bp Feature: domain Description: DUF4956 Location: 1 370645-1 371 008 bp Feature: gene Location: 1442535-1442693 bp Feature: gene Location: 1442786-1443136 bp Feature: gene Location: 1443316-1444593 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1443520-1444135 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 443520-1 4441 35 bp Feature: domain Description: GIIM Note: maturase Location: 1444189-1444405 bp Feature: domain Description: GIIM Note: maturase Location: 1 4441 89-1 444405 bp Feature: gene Location: 1444958-1445125 bp Feature: gene Location: 1445143-1445883 bp Feature: domain Description: GlnQ Location: 1445161-1445872 bp Feature: domain Description: GlnQ Location: 1 4451 61 -1 445872 bp Feature: gene Location: 1616354-1617838 bp Feature: domain Description: TraC-F-type Location: 1616672-1617527 bp Feature: domain Description: TraC-F-type Location: 1 61 6672-1 61 7527 bp Feature: gene Location: 1617843-1617977 bp Feature: gene Location: 1618348-1620045 bp Feature: RT Description: RVT_N Location: 1618444-1618684 bp Feature: RT Description: RVT_N Location: 1 61 8444-1 61 8684 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1618732-1619392 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 61 8732-1 61 9392 bp Feature: domain Description: GIIM Note: maturase Location: 1619461-1619680 bp Feature: domain Description: GIIM Note: maturase Location: 1 61 9461 -1 61 9680 bp Feature: gene Location: 1619978-1621018 bp Feature: domain Description: TraC-F-type Location: 1620143-1620839 bp Feature: domain Description: TraC-F-type Location: 1 6201 43-1 620839 bp Feature: gene Location: 1621015-1623807 bp Feature: domain Description: Peptidase_M23 Location: 1622449-1622659 bp Feature: domain Description: Peptidase_M23 Location: 1 622449-1 622659 bp Feature: domain Description: Phage_lysozyme2 Location: 1622806-1623316 bp Feature: domain Description: Phage_lysozyme2 Location: 1 622806-1 62331 6 bp Feature: domain Description: PRK08581 Location: 1623433-1623769 bp Feature: domain Description: PRK08581 Location: 1 623433-1 623769 bp Feature: gene Location: 1632493-1633947 bp Feature: gene Location: 1633980-1638488 bp Feature: domain Description: N6_Mtase Location: 1634502-1635093 bp Feature: domain Description: N6_Mtase Location: 1 634502-1 635093 bp Feature: domain Description: COG4646 Location: 1635684-1637991 bp Feature: domain Description: COG4646 Location: 1 635684-1 637991 bp Feature: domain Description: KOG0390 Location: 1638258-1638459 bp Feature: domain Description: KOG0390 Location: 1 638258-1 638459 bp Feature: gene Location: 1639048-1640706 bp Feature: RT Description: RVT_N Location: 1639093-1639336 bp Feature: RT Description: RVT_N Location: 1 639093-1 639336 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1639381-1640029 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 639381 -1 640029 bp Feature: domain Description: GIIM Note: maturase Location: 1640086-1640314 bp Feature: domain Description: GIIM Note: maturase Location: 1 640086-1 64031 4 bp Feature: gene Location: 1640840-1641649 bp Feature: gene Location: 1641719-1642018 bp Feature: gene Location: 1803383-1804207 bp Feature: domain Description: Cof Location: 1803392-1804193 bp Feature: domain Description: Cof Location: 1 803392-1 8041 93 bp Feature: gene Location: 1804207-1805817 bp Feature: domain Description: PRK10416 Location: 1804546-1805806 bp Feature: domain Description: PRK1 041 6 Location: 1 804546-1 805806 bp Feature: gene Location: 1806335-1807645 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1806572-1807187 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 806572-1 8071 87 bp Feature: domain Description: GIIM Note: maturase Location: 1807241-1807457 bp Feature: domain Description: GIIM Note: maturase Location: 1 807241 -1 807457 bp Feature: gene Location: 1807711-1808523 bp Feature: domain Description: YcgQ Location: 1807714-1808521 bp Feature: domain Description: YcgQ Location: 1 80771 4-1 808521 bp Feature: gene Location: 1808523-1809425 bp Feature: domain Description: YraQ Location: 1808526-1809423 bp Feature: domain Description: YraQ Location: 1 808526-1 809423 bp Feature: gene Location: 1923454-1924023 bp Feature: domain Description: ThiW Location: 1923469-1924018 bp Feature: domain Description: ThiW Location: 1 923469-1 92401 8 bp Feature: gene Location: 1924020-1924448 bp Feature: domain Description: ABC_cobalt Location: 1924038-1924392 bp Feature: domain Description: ABC_cobalt Location: 1 924038-1 924392 bp Feature: gene Location: 1924929-1926239 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1925166-1925781 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 9251 66-1 925781 bp Feature: domain Description: GIIM Note: maturase Location: 1925835-1926051 bp Feature: domain Description: GIIM Note: maturase Location: 1 925835-1 926051 bp Feature: gene Location: 1926435-1927721 bp Feature: domain Description: EcfA2 Location: 1926438-1927047 bp Feature: domain Description: EcfA2 Location: 1 926438-1 927047 bp Feature: domain Description: EcfA2 Location: 1927137-1927704 bp Feature: domain Description: EcfA2 Location: 1 9271 37-1 927704 bp Feature: gene Location: 1927805-1928377 bp Feature: domain Description: EcfT Location: 1927811-1928369 bp Feature: domain Description: EcfT Location: 1 92781 1 -1 928369 bp Feature: gene Location: 1982267-1983256 bp Feature: domain Description: lipoyltrans Location: 1982282-1983230 bp Feature: domain Description: lipoyltrans Location: 1 982282-1 983230 bp Feature: gene Location: 1983304-1983513 bp Feature: gene Location: 1983845-1985155 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1984082-1984697 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 984082-1 984697 bp Feature: domain Description: GIIM Note: maturase Location: 1984751-1984970 bp Feature: domain Description: GIIM Note: maturase Location: 1 984751 -1 984970 bp Feature: gene Location: 1985221-1985892 bp Feature: domain Description: COG3442 Location: 1985224-1985881 bp Feature: domain Description: COG3442 Location: 1 985224-1 985881 bp Feature: gene Location: 1986006-1987349 bp Feature: domain Description: MurE Location: 1986039-1987344 bp Feature: domain Description: MurE Location: 1 986039-1 987344 bp Feature: gene Location: 2023380-2023961 bp Feature: domain Description: sigpep_I_bact Location: 2023482-2023932 bp Feature: domain Description: sigpep_I_bact Location: 2023482-2023932 bp Feature: gene Location: 2023979-2024146 bp Feature: gene Location: 2024478-2025788 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2024715-2025330 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 202471 5-2025330 bp Feature: domain Description: GIIM Note: maturase Location: 2025384-2025600 bp Feature: domain Description: GIIM Note: maturase Location: 2025384-2025600 bp Feature: gene Location: 2026076-2027890 bp Feature: domain Description: PRK00331 Location: 2026079-2027888 bp Feature: domain Description: PRK00331 Location: 2026079-2027888 bp Feature: gene Location: 2028053-2028382 bp Feature: domain Description: PRK10220 Location: 2028056-2028380 bp Feature: domain Description: PRK1 0220 Location: 2028056-2028380 bp Feature: gene Location: 2152449-2153021 bp Feature: domain Description: COG4684 Location: 2152452-2153016 bp Feature: domain Description: COG4684 Location: 21 52452-21 5301 6 bp Feature: gene Location: 2153131-2154849 bp Feature: domain Description: PGM2 Location: 2153248-2154823 bp Feature: domain Description: PGM2 Location: 21 53248-21 54823 bp Feature: gene Location: 2155368-2156678 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2155605-2156220 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 21 55605-21 56220 bp Feature: domain Description: GIIM Note: maturase Location: 2156274-2156490 bp Feature: domain Description: GIIM Note: maturase Location: 21 56274-21 56490 bp Feature: gene Location: 2156769-2156966 bp Feature: gene Location: 2156980-2158713 bp Feature: domain Description: MdlB Location: 2157016-2158708 bp Feature: domain Description: MdlB Location: 21 5701 6-21 58708 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK05764 (aspartate aminotransferase; Provisional), PRK07246 (bifunctional ATP-dependent DNA helicase/DNA polymerase III subunit epsilon; Validated), RVT-GII, GIIM (pfam08388), PRK08643 ((S)-acetoin forming diacetyl reductase), TTHA1623-like_MBL-fold (cd16322), RHOD (smart00450), ROK_glcA_fam (TIGR00744), RVT_N (pfam13655), YqgQ (COG4483)
Transposase_mut (pfam00872), Peptidases_S8_C5a_Peptidase (cd07475), fn3_5 (pfam06280), CHU_C (pfam13585), ElaA (COG2153), CelA (TIGR03030), CelC (COG1447), DeoR (COG2390), PhoE (COG0406), PRK08295 (RNA polymerase sporulation sigma factor SigH)
DUF2992 (pfam11208), NTP_transf_6 (pfam06042), AXE1 (pfam05448), NagC (COG1940), NAL (cd00954), RseP (COG0750), PRK09194 (prolyl-tRNA synthetase; Provisional), PRK08581 (amidase domain-containing protein), polC (TIGR00354), TraC-F-type (TIGR02746)
Peptidase_M23 (pfam01551), Phage_lysozyme2 (pfam18013), PRK07726 (DNA topoisomerase 3), DUF3991 (pfam13154), Toprim_2 (pfam13155), PBECR4 (pfam18813), Peptidase_M78 (pfam06114), PRK12739 (elongation factor G; Reviewed), GapA (COG0057), lipo_e_P4 (TIGR01533)
Pgk (COG0126), Trep_Strep (TIGR02185), CbiQ (pfam02361), EcfT (COG0619), ABC_cobalt_CbiO_domain1 (cd03225), MdlB (COG1132), ABCC_MsbA (cd03251), Der (COG1160), HepA (COG0553), MurC (COG0773)
PRK12267 (methionyl-tRNA synthetase; Reviewed), Branch_AA_trans (pfam05525), PolyPPase_VTC_like (cd07750), DUF4956 (pfam16316), GlnQ (COG1126), N6_Mtase (pfam02384), COG4646 (Adenine-specific DNA methylase, N12 class ), KOG0390 (KOG0390, DNA repair protein, SNF2 family ), Cof (COG0561), PRK10416 (signal recognition particle-docking protein FtsY; Provisional)
YcgQ (COG3689), YraQ (COG0701), ThiW (pfam09512), ABC_cobalt (pfam09819), EcfA2 (COG1122), lipoyltrans (TIGR00545), COG3442 (Glutamine amidotransferase related to the GATase domain of CobQ ), MurE (COG0769), sigpep_I_bact (TIGR02227), PRK00331 (isomerizing glutamine--fructose-6-phosphate transaminase)
PRK10220 (phnA family protein), COG4684 (Uncharacterized membrane protein ), PGM2 (cd05799)

Seq: UHEQ01000003.1 Streptococcus agalactiae strain NCTC8185 genome assembly, contig: ERS1037085SCcontig000003, whole genome shotgun sequence (134042 bp)
Overview 1 RT 1: 59412-70263 bp Neighborhood of RT #1 [59412, 70265] strep_RK_lipo Inhibitor_I9 Peptidases_S8_C5a_Peptidase fn3_5 PTZ00121 RVT-GII GIIM M13 PepO Feature: gene Location: 59412-66191 bp Feature: domain Description: strep_RK_lipo Location: 59442-59547 bp Feature: domain Description: strep_RK_lipo Location: 59442 -59547 bp Feature: domain Description: Inhibitor_I9 Location: 60051-60333 bp Feature: domain Description: Inhibitor_I9 Location: 60051-60333 bp Feature: domain Description: Peptidases_S8_C5a_Peptidase Location: 60390-61839 bp Feature: domain Description: Peptidases_S8_C5a_Peptidase Location: 60390-61839 bp Feature: domain Description: fn3_5 Location: 61902-62226 bp Feature: domain Description: fn3_5 Location: 61902 -62 2 2 6 bp Feature: domain Description: PTZ00121 Location: 65655-65997 bp Feature: domain Description: PTZ0012 1 Location: 65655-65997 bp Feature: gene Location: 66541-66702 bp Feature: gene Location: 66773-68083 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 67010-67625 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 67010-6762 5 bp Feature: domain Description: GIIM Note: maturase Location: 67679-67895 bp Feature: domain Description: GIIM Note: maturase Location: 67679-67895 bp Feature: gene Location: 68233-68910 bp Feature: domain Description: M13 Location: 68365-68845 bp Feature: domain Description: M13 Location: 68365-68845 bp Feature: gene Location: 68859-70265 bp Feature: domain Description: PepO Location: 68868-70263 bp Feature: domain Description: PepO Location: 68868-702 63 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT strep_RK_lipo (TIGR03726), Inhibitor_I9 (pfam05922), Peptidases_S8_C5a_Peptidase (cd07475), fn3_5 (pfam06280), PTZ00121 (MAEBL; Provisional), RVT-GII, GIIM (pfam08388), M13 (cd08662), PepO (COG3590)