myRT

myRT report for GCA_900459205.1_43874_E01

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Seq: UHFG01000004.1 Streptococcus dysgalactiae subsp. dysgalactiae strain NCTC4670 genome assembly, contig: ERS1037082SCcontig000004, whole genome shotgun sequence (2220415 bp)
Overview 1 RT 1: 513331-525379 bp 2 RT 2: 751662-760643 bp Neighborhood of RT #1 [513331, 525379] N6_Mtase COG4646 RVT-GII Intron_maturas2 HNHc RVT_N RVT-GII GIIM Neighborhood of RT #2 [751662, 760672] RVT_N RVT-GII GIIM N6_Mtase COG4646 KOG0390 Feature: gene Location: 513331-519249 bp Feature: domain Description: N6_Mtase Location: 515359-515947 bp Feature: domain Description: N6_Mtase Location: 51 5359-51 5947 bp Feature: domain Description: COG4646 Location: 516541-518845 bp Feature: domain Description: COG4646 Location: 51 6541 -51 8845 bp Feature: gene Location: 519373-519573 bp Feature: gene Location: 519813-521624 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 520077-520899 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 520077-520899 bp Feature: domain Description: Intron_maturas2 Location: 520968-521439 bp Feature: domain Description: Intron_maturas2 Location: 520968-521 439 bp Feature: domain Description: HNHc Note: nucleases Location: 521442-521595 bp Feature: domain Description: HNHc Note: nucleases Location: 521 442-521 595 bp Feature: gene Location: 522023-522253 bp Feature: gene Location: 522288-524066 bp Feature: RT Description: RVT_N Location: 522453-522696 bp Feature: RT Description: RVT_N Location: 522453-522696 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 522741-523389 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 522741 -523389 bp Feature: domain Description: GIIM Note: maturase Location: 523446-523674 bp Feature: domain Description: GIIM Note: maturase Location: 523446-523674 bp Feature: gene Location: 524199-525008 bp Feature: gene Location: 525080-525379 bp Feature: gene Location: 751662-751961 bp Feature: gene Location: 752031-752840 bp Feature: gene Location: 752974-754752 bp Feature: RT Description: RVT_N Location: 753139-753382 bp Feature: RT Description: RVT_N Location: 7531 39-753382 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 753427-754075 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 753427-754075 bp Feature: domain Description: GIIM Note: maturase Location: 754132-754360 bp Feature: domain Description: GIIM Note: maturase Location: 7541 32-754360 bp Feature: gene Location: 754746-755039 bp Feature: gene Location: 755192-760672 bp Feature: domain Description: N6_Mtase Location: 756686-757277 bp Feature: domain Description: N6_Mtase Location: 756686-757277 bp Feature: domain Description: COG4646 Location: 757868-760175 bp Feature: domain Description: COG4646 Location: 757868-7601 75 bp Feature: domain Description: KOG0390 Location: 760445-760643 bp Feature: domain Description: KOG0390 Location: 760445-760643 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT N6_Mtase (pfam02384), COG4646 (Adenine-specific DNA methylase, N12 class ), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), RVT_N (pfam13655), GIIM (pfam08388), KOG0390 (KOG0390, DNA repair protein, SNF2 family )