myRT

myRT report for GCA_900459475.1_46463_D01

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Seq: UHFI01000001.1 Streptococcus equi subsp. zooepidemicus strain NCTC4676 genome assembly, contig: ERS1143230SCcontig000001, whole genome shotgun sequence (2104860 bp)
Overview 1 RT 1: 1918807-1928034 bp 2 RT 2: 1935764-1943455 bp Neighborhood of RT #1 [1918807, 1928034] KOG1000 KOG4768 RVT-GII N6_Mtase COG4646 Neighborhood of RT #2 [1935764, 1943538] Peptidase_M23 Phage_lysozyme2 PRK08581 TraC-F-type RVT_N RVT-GII GIIM TraC-F-type PrgI Feature: gene Location: 1918807-1920150 bp Feature: domain Description: KOG1000 Location: 1919086-1919404 bp Feature: domain Description: KOG1 000 Location: 1 91 9086-1 91 9404 bp Feature: gene Location: 1920288-1921085 bp Feature: domain Description: KOG4768 Location: 1920297-1921071 bp Feature: domain Description: KOG4768 Location: 1 920297-1 921 071 bp Feature: gene Location: 1921116-1922066 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1921377-1922061 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 921 377-1 922061 bp Feature: gene Location: 1922564-1927648 bp Feature: domain Description: N6_Mtase Location: 1924181-1924772 bp Feature: domain Description: N6_Mtase Location: 1 9241 81 -1 924772 bp Feature: domain Description: COG4646 Location: 1925366-1927493 bp Feature: domain Description: COG4646 Location: 1 925366-1 927493 bp Feature: gene Location: 1927690-1928034 bp Feature: gene Location: 1935764-1938568 bp Feature: domain Description: Peptidase_M23 Location: 1937210-1937423 bp Feature: domain Description: Peptidase_M23 Location: 1 93721 0-1 937423 bp Feature: domain Description: Phage_lysozyme2 Location: 1937567-1938077 bp Feature: domain Description: Phage_lysozyme2 Location: 1 937567-1 938077 bp Feature: domain Description: PRK08581 Location: 1938194-1938530 bp Feature: domain Description: PRK08581 Location: 1 9381 94-1 938530 bp Feature: gene Location: 1938565-1939533 bp Feature: domain Description: TraC-F-type Location: 1938658-1939354 bp Feature: domain Description: TraC-F-type Location: 1 938658-1 939354 bp Feature: gene Location: 1939538-1941235 bp Feature: RT Description: RVT_N Location: 1939634-1939874 bp Feature: RT Description: RVT_N Location: 1 939634-1 939874 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1939922-1940582 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 939922-1 940582 bp Feature: domain Description: GIIM Note: maturase Location: 1940654-1940870 bp Feature: domain Description: GIIM Note: maturase Location: 1 940654-1 940870 bp Feature: gene Location: 1941741-1943228 bp Feature: domain Description: TraC-F-type Location: 1942068-1942914 bp Feature: domain Description: TraC-F-type Location: 1 942068-1 94291 4 bp Feature: gene Location: 1943185-1943538 bp Feature: domain Description: PrgI Location: 1943197-1943455 bp Feature: domain Description: PrgI Location: 1 9431 97-1 943455 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT KOG1000 (KOG1000, Chromatin remodeling protein HARP/SMARCAL1, DEAD-box superfamily ), KOG4768 (KOG4768, Mitochondrial mRNA maturase ), RVT-GII, N6_Mtase (pfam02384), COG4646 (Adenine-specific DNA methylase, N12 class ), Peptidase_M23 (pfam01551), Phage_lysozyme2 (pfam18013), PRK08581 (amidase domain-containing protein), TraC-F-type (TIGR02746), RVT_N (pfam13655)
GIIM (pfam08388), PrgI (pfam12666)