myRT

myRT report for GCA_900459695.1_43188_C01

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Seq: UHGA01000006.1 Streptococcus pneumoniae strain NCTC11886 genome assembly, contig: ERS1003587SCcontig000006, whole genome shotgun sequence (2195503 bp)
Overview 1 RT 1: 1633516-1638569 bp 2 RT 2: 1927160-1932305 bp Neighborhood of RT #1 [1633516, 1638569] DUF3687 MFS_MefA_like RVT-GII GIIM RVT-GII Neighborhood of RT #2 [1927160, 1932310] RimL Acetyltransf_10 RVT-GII RVT-GII GIIM RuvB Feature: gene Location: 1633516-1633647 bp Feature: domain Description: DUF3687 Location: 1633528-1633645 bp Feature: domain Description: DUF3687 Location: 1 633528-1 633645 bp Feature: gene Location: 1633961-1635139 bp Feature: domain Description: MFS_MefA_like Location: 1633976-1635119 bp Feature: domain Description: MFS_MefA_like Location: 1 633976-1 6351 1 9 bp Feature: gene Location: 1635595-1636587 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1635598-1636129 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 635598-1 6361 29 bp Feature: domain Description: GIIM Note: maturase Location: 1636183-1636396 bp Feature: domain Description: GIIM Note: maturase Location: 1 6361 83-1 636396 bp Feature: gene Location: 1636591-1636872 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1636795-1636867 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 636795-1 636867 bp Feature: gene Location: 1637488-1637688 bp Feature: gene Location: 1637982-1638569 bp Feature: gene Location: 1927160-1927765 bp Feature: domain Description: RimL Location: 1927283-1927763 bp Feature: domain Description: RimL Location: 1 927283-1 927763 bp Feature: gene Location: 1927867-1928283 bp Feature: domain Description: Acetyltransf_10 Location: 1927945-1928236 bp Feature: domain Description: Acetyltransf_1 0 Location: 1 927945-1 928236 bp Feature: gene Location: 1929077-1929490 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1929281-1929488 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 929281 -1 929488 bp Feature: gene Location: 1929532-1929924 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1929535-1929853 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 929535-1 929853 bp Feature: gene Location: 1929947-1930333 bp Feature: domain Description: GIIM Note: maturase Location: 1929953-1930142 bp Feature: domain Description: GIIM Note: maturase Location: 1 929953-1 9301 42 bp Feature: gene Location: 1931312-1932310 bp Feature: domain Description: RuvB Location: 1931318-1932305 bp Feature: domain Description: RuvB Location: 1 931 31 8-1 932305 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF3687 (pfam12459), MFS_MefA_like (cd06173), RVT-GII, GIIM (pfam08388), RimL (COG1670), Acetyltransf_10 (pfam13673), RuvB (COG2255)