myRT

myRT report for GCA_900460175.1_50592_A01

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Seq: UHIB01000002.1 Legionella maceachernii strain NCTC11982 genome assembly, contig: ERS1324115SCcontig000002, whole genome shotgun sequence (124699 bp)
Overview 1 RT 1: 71540-77315 bp Neighborhood of RT #1 [71540, 77315] fn3_6 fn3_6 DUF1566 Avd_like RVT-DGRs DUF772 Feature: gene Location: 71540-73597 bp Feature: domain Description: fn3_6 Location: 72230-72353 bp Feature: domain Description: fn3_6 Location: 72230-72353 bp Feature: domain Description: fn3_6 Location: 72527-72647 bp Feature: domain Description: fn3_6 Location: 72527-72647 bp Feature: domain Description: DUF1566 Location: 73367-73583 bp Feature: domain Description: DUF1 566 Location: 73367-73583 bp Feature: gene Location: 73676-74029 bp Feature: domain Description: Avd_like Location: 73703-74009 bp Feature: domain Description: Avd_like Location: 73703-74009 bp Feature: gene Location: 74361-75560 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 74580-75336 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 74580-75336 bp Feature: gene Location: 75579-77039 bp Feature: domain Description: DUF772 Location: 75762-75954 bp Feature: domain Description: DUF772 Location: 75762-75954 bp Feature: gene Location: 77184-77315 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT fn3_6 (pfam17766), DUF1566 (pfam07603), Avd_like (cd16376), RVT-DGRs, DUF772 (pfam05598)

Seq: UHIB01000001.1 Legionella maceachernii strain NCTC11982 genome assembly, contig: ERS1324115SCcontig000001, whole genome shotgun sequence (3490820 bp)
Overview 1 RT 1: 3299595-3306239 bp 2 RT 2: 3317374-3321480 bp Neighborhood of RT #1 [3299595, 3306319] KOG0713 AHH RVT-GII group_II_RT_mat DDE_Tnp_IS66_C Neighborhood of RT #2 [3317374, 3321641] TnpB_IS66 COG3436 RVT-GII GIIM DDE_Tnp_1 Feature: gene Location: 3299595-3303329 bp Feature: domain Description: KOG0713 Location: 3299598-3299829 bp Feature: domain Description: KOG0713 Location: 32 99598-32 9982 9 bp Feature: domain Description: AHH Location: 3302955-3303267 bp Feature: domain Description: AHH Location: 3302 955-33032 67 bp Feature: gene Location: 3303344-3304822 bp Feature: gene Location: 3304971-3305153 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3304977-3305136 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3304977-3305136 bp Feature: gene Location: 3305238-3305525 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 3305367-3305523 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 3305367-330552 3 bp Feature: gene Location: 3305924-3306319 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 3306128-3306239 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 330612 8-33062 39 bp Feature: gene Location: 3317374-3317727 bp Feature: domain Description: TnpB_IS66 Location: 3317401-3317689 bp Feature: domain Description: TnpB_IS66 Location: 3317401-3317689 bp Feature: gene Location: 3317865-3318611 bp Feature: domain Description: COG3436 Location: 3318102-3318567 bp Feature: domain Description: COG3436 Location: 3318102 -3318567 bp Feature: gene Location: 3319043-3320350 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3319328-3319967 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 331932 8-3319967 bp Feature: domain Description: GIIM Note: maturase Location: 3320039-3320267 bp Feature: domain Description: GIIM Note: maturase Location: 332 0039-332 02 67 bp Feature: gene Location: 3320331-3320702 bp Feature: gene Location: 3320709-3321641 bp Feature: domain Description: DDE_Tnp_1 Location: 3320976-3321480 bp Feature: domain Description: DDE_Tnp_1 Location: 332 0976-332 1480 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT KOG0713 (KOG0713, Molecular chaperone (DnaJ superfamily) ), AHH (pfam14412), RVT-GII, group_II_RT_mat (TIGR04416), DDE_Tnp_IS66_C (pfam13817), TnpB_IS66 (pfam05717), COG3436 (Transposase ), GIIM (pfam08388), DDE_Tnp_1 (pfam01609)