myRT

myRT report for GCA_900460245.1_41665_F02

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Seq: UHIP01000001.1 Vibrio fluvialis strain NCTC11327 genome assembly, contig: ERS846864SCcontig000001, whole genome shotgun sequence (3169234 bp)
Overview 1 RT 1: 113755-123582 bp 2 RT 2: 3141160-3144615 bp Neighborhood of RT #1 [113755, 123620] groES groEL RVT_N RVT-GII GIIM HNHc RVT_N RVT-GII GIIM HNHc PRK10938 Neighborhood of RT #2 [3141160, 3144615] RadC RVT-UG7 Feature: gene Location: 113755-114045 bp Ori: SUP19066.1 Gene: groES Feature: domain Description: groES Location: 113758-114043 bp Feature: domain Description: groES Location: 1 1 3758-1 1 4043 bp Feature: gene Location: 114096-115733 bp Ori: SUP19069.1 Gene: groL_1 Feature: domain Description: groEL Location: 114102-115722 bp Feature: domain Description: groEL Location: 1 1 41 02-1 1 5722 bp Feature: gene Location: 116757-118415 bp Ori: SUP19073.1 Gene: ltrA_1 Feature: domain Description: RVT_N Location: 116814-117057 bp Feature: domain Description: RVT_N Location: 1 1 681 4-1 1 7057 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 117102-117747 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 1 71 02-1 1 7747 bp Feature: domain Description: GIIM Note: maturase Location: 117798-118032 bp Feature: domain Description: GIIM Note: maturase Location: 1 1 7798-1 1 8032 bp Feature: domain Description: HNHc Note: nucleases Location: 118260-118410 bp Feature: domain Description: HNHc Note: nucleases Location: 1 1 8260-1 1 841 0 bp Feature: gene Location: 119890-121584 bp Ori: SUP19076.1 Gene: ltrA_2 Feature: domain Description: RVT_N Location: 119947-120190 bp Feature: domain Description: RVT_N Location: 1 1 9947-1 201 90 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 120235-120880 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 20235-1 20880 bp Feature: domain Description: GIIM Note: maturase Location: 120931-121165 bp Feature: domain Description: GIIM Note: maturase Location: 1 20931 -1 21 1 65 bp Feature: domain Description: HNHc Note: nucleases Location: 121393-121543 bp Feature: domain Description: HNHc Note: nucleases Location: 1 21 393-1 21 543 bp Feature: gene Location: 121622-121924 bp Feature: gene Location: 122172-123620 bp Ori: SUP19085.1 Feature: domain Description: PRK10938 Location: 122202-123582 bp Feature: domain Description: PRK1 0938 Location: 1 22202-1 23582 bp Feature: gene Location: 3141160-3141633 bp Ori: SUP30756.1 Gene: ykfG_2 Feature: domain Description: RadC Location: 3141193-3141631 bp Feature: domain Description: RadC Location: 31 41 1 93-31 41 631 bp Feature: gene Location: 3141850-3141987 bp Feature: gene Location: 3142053-3143690 bp Ori: SUP30767.1 Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 3142491-3142890 bp Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 31 42491 -31 42890 bp Feature: gene Location: 3143678-3144424 bp Feature: gene Location: 3144505-3144615 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT groES (PRK14533), groEL (PRK12852), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507), PRK10938 (putative molybdenum transport ATP-binding protein ModF; Provisional), RadC (pfam04002), RVT-UG7