myRT

myRT report for GCA_900461155.1_51395_F01

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Seq: UAWD01000010.1 Clostridium perfringens strain NCTC8449 genome assembly, contig: ERS1374858SCcontig000010, whole genome shotgun sequence (83668 bp)
Overview 1 RT 1: 19844-28456 bp Neighborhood of RT #1 [19844, 28650] Peptidase_S41_IRBP DUF1097 RVT-UG8 RVT-UG3 PRK09219 TPR TPR_1 TPR TPR_1 Feature: gene Location: 19844-20941 bp Ori: SQB36920.1 Feature: domain Description: Peptidase_S41_IRBP Location: 19997-20663 bp Feature: domain Description: Peptidase_S41 _IRBP Location: 1 9997-20663 bp Feature: gene Location: 21269-21721 bp Ori: SQB36922.1 Gene: ycdZ Feature: domain Description: DUF1097 Location: 21293-21689 bp Feature: domain Description: DUF1 097 Location: 21 293-21 689 bp Feature: gene Location: 22068-24023 bp Ori: SQB36924.1 Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 22554-22989 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 22554-22989 bp Feature: gene Location: 24180-26015 bp Ori: SQB36927.1 Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 24987-25440 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 24987-25440 bp Feature: gene Location: 26910-27488 bp Ori: SQB36929.1 Gene: xpt_1 Feature: domain Description: PRK09219 Location: 26913-27486 bp Feature: domain Description: PRK0921 9 Location: 2691 3-27486 bp Feature: gene Location: 27661-28650 bp Ori: SQB36931.1 Feature: domain Description: TPR Location: 27769-27931 bp Feature: domain Description: TPR Location: 27769-27931 bp Feature: domain Description: TPR_1 Location: 27952-28042 bp Feature: domain Description: TPR_1 Location: 27952-28042 bp Feature: domain Description: TPR Location: 28054-28339 bp Feature: domain Description: TPR Location: 28054-28339 bp Feature: domain Description: TPR_1 Location: 28378-28456 bp Feature: domain Description: TPR_1 Location: 28378-28456 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Peptidase_S41_IRBP (cd07563), DUF1097 (pfam06496), RVT-UG8, RVT-UG3, PRK09219 (xanthine phosphoribosyltransferase; Validated), TPR (smart00028), TPR_1 (pfam00515)

Seq: UAWD01000006.1 Clostridium perfringens strain NCTC8449 genome assembly, contig: ERS1374858SCcontig000006, whole genome shotgun sequence (89223 bp)
Overview 1 RT 1: 47381-54556 bp Neighborhood of RT #1 [47381, 54561] RMtype1_S_HmoORF3075P-TRD1-CR1_like RVT-UG15 COG0610 HsdM Feature: gene Location: 47381-47785 bp Ori: SQB36295.1 Feature: domain Description: RMtype1_S_HmoORF3075P-TRD1-CR1_like Location: 47387-47747 bp Feature: domain Description: RMtype1_S_HmoORF3075P-TRD1-CR1_like Location: 47387-47747 bp Feature: gene Location: 47913-48485 bp Feature: gene Location: 48568-50058 bp Ori: SQB36297.1 Feature: RT Description: RVT-UG15 Note: UG15 RT Location: 48994-49387 bp Feature: RT Description: RVT-UG15 Note: UG15 RT Location: 48994-49387 bp Feature: gene Location: 50197-52953 bp Ori: SQB36298.1 Gene: hsdR_1 Feature: domain Description: COG0610 Location: 50206-52891 bp Feature: domain Description: COG0610 Location: 502 06-52 891 bp Feature: gene Location: 53017-54561 bp Ori: SQB36299.1 Gene: hsdM_1 Feature: domain Description: HsdM Location: 53044-54556 bp Feature: domain Description: HsdM Location: 53044-54556 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RMtype1_S_HmoORF3075P-TRD1-CR1_like (cd17520), RVT-UG15, COG0610 (Type I site-specific restriction-modification system, R (restriction) subunit and related helicases ), HsdM (COG0286)