myRT

myRT report for GCA_900461175.1_32407_C01

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Seq: UFVW01000001.1 Citrobacter koseri strain NCTC11077 genome assembly, contig: ERS530417SCcontig000001, whole genome shotgun sequence (4801883 bp)
Overview 1 RT 1: 1444149-1449076 bp Neighborhood of RT #1 [1444149, 1449318] HTH_38 Tra8 PHA02517 RVT-GII GIIM PHA02517 HTH_28 Tra5 Feature: gene Location: 1444149-1444880 bp Feature: domain Description: HTH_38 Location: 1444158-1444272 bp Feature: domain Description: HTH_38 Location: 1 4441 58-1 444272 bp Feature: domain Description: Tra8 Location: 1444308-1444845 bp Feature: domain Description: Tra8 Location: 1 444308-1 444845 bp Feature: gene Location: 1445029-1445439 bp Feature: domain Description: PHA02517 Location: 1445035-1445374 bp Feature: domain Description: PHA0251 7 Location: 1 445035-1 445374 bp Feature: gene Location: 1446031-1447554 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1446304-1447036 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 446304-1 447036 bp Feature: domain Description: GIIM Note: maturase Location: 1447111-1447309 bp Feature: domain Description: GIIM Note: maturase Location: 1 4471 1 1 -1 447309 bp Feature: gene Location: 1447677-1448111 bp Feature: domain Description: PHA02517 Location: 1447680-1448103 bp Feature: domain Description: PHA0251 7 Location: 1 447680-1 4481 03 bp Feature: gene Location: 1448074-1449318 bp Feature: domain Description: HTH_28 Location: 1448236-1448356 bp Feature: domain Description: HTH_28 Location: 1 448236-1 448356 bp Feature: domain Description: Tra5 Location: 1448377-1449076 bp Feature: domain Description: Tra5 Location: 1 448377-1 449076 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_38 (pfam13936), Tra8 (COG2826), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), HTH_28 (pfam13518), Tra5 (COG2801)