myRT

myRT report for GCA_900461245.1_59014_B02

Download annotations/find similar RTs

Seq: UAWI01000002.1 Clostridium tetanomorphum strain NCTC500 genome assembly, contig: ERS1943136SCcontig000002, whole genome shotgun sequence (1256440 bp)
Overview 1 RT 1: 305240-312331 bp 2 RT 2: 434319-439639 bp Neighborhood of RT #1 [305240, 312345] SASP HTH_ARAC RVT-GII RVT-GII RVT-GII GIIM RVT-GII GIIM PBP2_NikA_DppA_OppA_like_19 Neighborhood of RT #2 [434319, 439650] ArnT PRK02971 RVT-GII RVT-GII PRK05764 PRK13780 Feature: gene Location: 305240-305446 bp Feature: domain Description: SASP Location: 305249-305435 bp Feature: domain Description: SASP Location: 305249-305435 bp Feature: gene Location: 305702-306649 bp Feature: domain Description: HTH_ARAC Location: 306398-306644 bp Feature: domain Description: HTH_ARAC Location: 306398-306644 bp Feature: gene Location: 307158-307745 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 307503-307734 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 307503-307734 bp Feature: gene Location: 308229-309518 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 308484-309168 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 308484-3091 68 bp Feature: gene Location: 309651-310445 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 309654-310059 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 309654-31 0059 bp Feature: domain Description: GIIM Note: maturase Location: 310140-310371 bp Feature: domain Description: GIIM Note: maturase Location: 31 01 40-31 0371 bp Feature: gene Location: 310564-311115 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 310570-310714 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 31 0570-31 071 4 bp Feature: domain Description: GIIM Note: maturase Location: 310723-310954 bp Feature: domain Description: GIIM Note: maturase Location: 31 0723-31 0954 bp Feature: gene Location: 311498-311749 bp Feature: gene Location: 311782-312345 bp Feature: domain Description: PBP2_NikA_DppA_OppA_like_19 Location: 311785-312331 bp Feature: domain Description: PBP2_NikA_DppA_OppA_like_1 9 Location: 31 1 785-31 2331 bp Feature: gene Location: 434319-435575 bp Feature: domain Description: ArnT Location: 434523-434982 bp Feature: domain Description: ArnT Location: 434523-434982 bp Feature: gene Location: 435572-435928 bp Feature: domain Description: PRK02971 Location: 435587-435923 bp Feature: domain Description: PRK02971 Location: 435587-435923 bp Feature: gene Location: 436387-436917 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 436732-436912 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 436732-43691 2 bp Feature: gene Location: 436934-437239 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 436937-437201 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 436937-437201 bp Feature: gene Location: 438063-439289 bp Feature: domain Description: PRK05764 Location: 438102-439284 bp Feature: domain Description: PRK05764 Location: 4381 02-439284 bp Feature: gene Location: 439393-439650 bp Feature: domain Description: PRK13780 Location: 439396-439639 bp Feature: domain Description: PRK1 3780 Location: 439396-439639 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SASP (pfam00269), HTH_ARAC (smart00342), RVT-GII, GIIM (pfam08388), PBP2_NikA_DppA_OppA_like_19 (cd08518), ArnT (COG1807), PRK02971 (4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional), PRK05764 (aspartate aminotransferase; Provisional), PRK13780 (phosphocarrier protein HPr; Provisional)

Seq: UAWI01000004.1 Clostridium tetanomorphum strain NCTC500 genome assembly, contig: ERS1943136SCcontig000004, whole genome shotgun sequence (423358 bp)
Overview 1 RT 1: 106174-114915 bp 2 RT 2: 384852-385308 bp 3 RT 3: 410984-416817 bp Neighborhood of RT #1 [106174, 115013] LytT RVT-GII GIIM RVT-GII GIIM RVT-GII RVT-GII SalY LolD Neighborhood of RT #2 [384852, 385340] RVT-GII Neighborhood of RT #3 [410984, 416817] PRK06242 NapF RVT-GII GIIM RVT-GII GIIM RVT-GII RVT-GII Feature: gene Location: 106174-107190 bp Feature: gene Location: 107194-107934 bp Feature: domain Description: LytT Location: 107215-107905 bp Feature: domain Description: LytT Location: 1072 15-107905 bp Feature: gene Location: 108359-108640 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 108362-108464 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 108362 -108464 bp Feature: domain Description: GIIM Note: maturase Location: 108518-108635 bp Feature: domain Description: GIIM Note: maturase Location: 108518-108635 bp Feature: gene Location: 108759-109553 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 108762-109167 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 108762 -109167 bp Feature: domain Description: GIIM Note: maturase Location: 109248-109479 bp Feature: domain Description: GIIM Note: maturase Location: 1092 48-109479 bp Feature: gene Location: 109686-110975 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 109941-110625 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 109941-11062 5 bp Feature: gene Location: 111178-111765 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 111523-111754 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11152 3-111754 bp Feature: gene Location: 112260-114230 bp Feature: domain Description: SalY Location: 112263-114177 bp Feature: domain Description: SalY Location: 112 2 63-114177 bp Feature: gene Location: 114243-115013 bp Feature: domain Description: LolD Location: 114255-114915 bp Feature: domain Description: LolD Location: 1142 55-114915 bp Feature: gene Location: 384852-385340 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 384858-385308 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 384858-385308 bp Feature: gene Location: 410984-411142 bp Feature: gene Location: 411165-411941 bp Feature: domain Description: PRK06242 Location: 411177-411501 bp Feature: domain Description: PRK062 42 Location: 411177-411501 bp Feature: domain Description: NapF Location: 411672-411912 bp Feature: domain Description: NapF Location: 411672 -411912 bp Feature: gene Location: 412203-412754 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 412209-412353 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 412 2 09-412 353 bp Feature: domain Description: GIIM Note: maturase Location: 412362-412593 bp Feature: domain Description: GIIM Note: maturase Location: 412 362 -412 593 bp Feature: gene Location: 412873-413667 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 412876-413281 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 412 876-4132 81 bp Feature: domain Description: GIIM Note: maturase Location: 413362-413593 bp Feature: domain Description: GIIM Note: maturase Location: 413362 -413593 bp Feature: gene Location: 413800-415089 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 414055-414739 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 414055-414739 bp Feature: gene Location: 415572-415769 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 415578-415758 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 415578-415758 bp Feature: gene Location: 415884-416153 bp Feature: gene Location: 416518-416817 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT LytT (COG3279), RVT-GII, GIIM (pfam08388), SalY (COG0577), LolD (COG1136), PRK06242 (flavodoxin; Provisional), NapF (COG1145)

Seq: UAWI01000001.1 Clostridium tetanomorphum strain NCTC500 genome assembly, contig: ERS1943136SCcontig000001, whole genome shotgun sequence (322801 bp)
Overview 1 RT 1: 318697-322232 bp Neighborhood of RT #1 [318697, 322582] PRK05568 RVT-GII RVT-GII Feature: gene Location: 318697-319125 bp Feature: domain Description: PRK05568 Location: 318700-319120 bp Feature: domain Description: PRK05568 Location: 3 18700-3 19120 bp Feature: gene Location: 319593-319856 bp Feature: gene Location: 320221-320703 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 320566-320698 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 20566-3 20698 bp Feature: gene Location: 321293-322582 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 321548-322232 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 21548-3 2223 2 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK05568 (flavodoxin; Provisional), RVT-GII

Seq: UAWI01000008.1 Clostridium tetanomorphum strain NCTC500 genome assembly, contig: ERS1943136SCcontig000010, whole genome shotgun sequence (530170 bp)
Overview 1 RT 1: 304279-313662 bp 2 RT 2: 514885-522523 bp Neighborhood of RT #1 [304279, 313670] addA_Gpos LDH_2 RVT-GII RVT-GII RVT-GII GIIM RVT-GII GIIM Pat_ExoU_VipD_like PRK05469 Neighborhood of RT #2 [514885, 522558] sulfite_red_B sulfite_red_C RVT-GII RVT-GII RVT-GII GIIM RVT-GII GIIM HypF HypF Feature: gene Location: 304279-305490 bp Feature: domain Description: addA_Gpos Location: 304282-305485 bp Feature: domain Description: addA_Gpos Location: 304 282-3054 85 bp Feature: gene Location: 305648-306595 bp Feature: domain Description: LDH_2 Location: 305669-306584 bp Feature: domain Description: LDH_2 Location: 305669-306584 bp Feature: gene Location: 307071-307658 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 307416-307647 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3074 16-30764 7 bp Feature: gene Location: 308142-309200 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 308397-309081 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 308397-309081 bp Feature: gene Location: 309564-310358 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 309567-309972 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 309567-309972 bp Feature: domain Description: GIIM Note: maturase Location: 310053-310284 bp Feature: domain Description: GIIM Note: maturase Location: 310053-310284 bp Feature: gene Location: 310477-311028 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 310483-310627 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3104 83-310627 bp Feature: domain Description: GIIM Note: maturase Location: 310636-310867 bp Feature: domain Description: GIIM Note: maturase Location: 310636-310867 bp Feature: gene Location: 311296-312213 bp Feature: domain Description: Pat_ExoU_VipD_like Location: 311314-311899 bp Feature: domain Description: Pat_ExoU_VipD_like Location: 311314 -311899 bp Feature: gene Location: 312444-313670 bp Feature: domain Description: PRK05469 Location: 312450-313662 bp Feature: domain Description: PRK054 69 Location: 3124 50-313662 bp Feature: gene Location: 514885-515679 bp Feature: domain Description: sulfite_red_B Location: 514897-515677 bp Feature: domain Description: sulfite_red_B Location: 514 897-515677 bp Feature: gene Location: 515692-516642 bp Feature: domain Description: sulfite_red_C Location: 515698-516637 bp Feature: domain Description: sulfite_red_C Location: 515698-516637 bp Feature: gene Location: 517105-517692 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 517450-517681 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5174 50-517681 bp Feature: gene Location: 518176-519465 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 518431-519115 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5184 31-519115 bp Feature: gene Location: 519598-520392 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 519601-520006 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 519601-520006 bp Feature: domain Description: GIIM Note: maturase Location: 520087-520318 bp Feature: domain Description: GIIM Note: maturase Location: 520087-520318 bp Feature: gene Location: 520511-521062 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 520517-520661 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 520517-520661 bp Feature: domain Description: GIIM Note: maturase Location: 520670-520901 bp Feature: domain Description: GIIM Note: maturase Location: 520670-520901 bp Feature: gene Location: 521291-521992 bp Feature: domain Description: HypF Location: 521309-521984 bp Feature: domain Description: HypF Location: 521309-521984 bp Feature: gene Location: 522046-522558 bp Feature: domain Description: HypF Location: 522049-522523 bp Feature: domain Description: HypF Location: 52204 9-522523 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT addA_Gpos (TIGR02785), LDH_2 (cd05292), RVT-GII, GIIM (pfam08388), Pat_ExoU_VipD_like (cd07207), PRK05469 (tripeptide aminopeptidase PepT), sulfite_red_B (TIGR02911), sulfite_red_C (TIGR02912), HypF (COG0068)

Seq: UAWI01000009.1 Clostridium tetanomorphum strain NCTC500 genome assembly, contig: ERS1943136SCcontig000011, whole genome shotgun sequence (476461 bp)
Overview 1 RT 1: 83350-91134 bp Neighborhood of RT #1 [83350, 91166] NPY1 RVT-GII RVT-GII RVT-GII GIIM RVT-GII GIIM HypF HypF Feature: gene Location: 83350-83889 bp Feature: domain Description: NPY1 Location: 83356-83854 bp Feature: domain Description: NPY1 Location: 8335 6-8385 4 bp Feature: gene Location: 83996-84358 bp Feature: gene Location: 85097-85294 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 85103-85283 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 85 103-85 283 bp Feature: gene Location: 85778-87067 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 86033-86717 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 86033-86717 bp Feature: gene Location: 87200-87994 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 87203-87608 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 87203-87608 bp Feature: domain Description: GIIM Note: maturase Location: 87689-87920 bp Feature: domain Description: GIIM Note: maturase Location: 87689-87920 bp Feature: gene Location: 88113-88664 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 88119-88263 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 88119-88263 bp Feature: domain Description: GIIM Note: maturase Location: 88272-88503 bp Feature: domain Description: GIIM Note: maturase Location: 88272-885 03 bp Feature: gene Location: 88894-90855 bp Feature: domain Description: HypF Location: 88912-90832 bp Feature: domain Description: HypF Location: 88912-90832 bp Feature: gene Location: 90942-91166 bp Feature: domain Description: HypF Location: 90948-91134 bp Feature: domain Description: HypF Location: 90948-91134 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT NPY1 (COG2816), RVT-GII, GIIM (pfam08388), HypF (COG0068)

Seq: UAWI01000010.1 Clostridium tetanomorphum strain NCTC500 genome assembly, contig: ERS1943136SCcontig000012, whole genome shotgun sequence (748640 bp)
Overview 1 RT 1: 73-3199 bp Neighborhood of RT #1 [73, 3252] RVT-GII GIIM RVT-GII GIIM spo_ytxC Feature: gene Location: 73-708 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 76-322 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 76 -322 bp Feature: domain Description: GIIM Note: maturase Location: 403-634 bp Feature: domain Description: GIIM Note: maturase Location: 403-6 34 bp Feature: gene Location: 827-1378 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 833-977 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 833-977 bp Feature: domain Description: GIIM Note: maturase Location: 986-1217 bp Feature: domain Description: GIIM Note: maturase Location: 986 -1217 bp Feature: gene Location: 1474-2196 bp Feature: gene Location: 2353-3252 bp Feature: domain Description: spo_ytxC Location: 2368-3199 bp Feature: domain Description: spo_ytxC Location: 236 8-3199 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), spo_ytxC (TIGR02834)