myRT

myRT report for GCA_900461445.1_44503_B02

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Seq: UFQY01000006.1 Klebsiella pneumoniae strain NCTC13694 genome assembly, contig: ERS1058921SCcontig000006, whole genome shotgun sequence (4959154 bp)
Overview 1 RT 1: 1676436-1681282 bp 2 RT 2: 1808622-1815607 bp 3 RT 3: 2210921-2215792 bp 4 RT 4: 3372158-3374988 bp Neighborhood of RT #1 [1676436, 1681479] SGNH_hydrolase_peri1 RVT-GII PRK10276 Neighborhood of RT #2 [1808622, 1815660] PRK05433 RVT-GII SGNH_hydrolase_peri1 Neighborhood of RT #3 [2210921, 2215806] dacD RVT-GII PRK10016 YccC Neighborhood of RT #4 [3372158, 3374999] PRK10276 RVT-GII DinI Feature: gene Location: 1676436-1678940 bp Feature: domain Description: SGNH_hydrolase_peri1 Location: 1678455-1678887 bp Feature: domain Description: SGNH_hydrolase_peri1 Location: 1 678455-1 678887 bp Feature: gene Location: 1679074-1679307 bp Feature: gene Location: 1679361-1680845 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1679763-1680453 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 679763-1 680453 bp Feature: gene Location: 1680731-1681162 bp Feature: gene Location: 1681162-1681479 bp Feature: domain Description: PRK10276 Location: 1681168-1681282 bp Feature: domain Description: PRK1 0276 Location: 1 681 1 68-1 681 282 bp Feature: gene Location: 1808622-1810421 bp Feature: domain Description: PRK05433 Location: 1808625-1810410 bp Feature: domain Description: PRK05433 Location: 1 808625-1 81 041 0 bp Feature: gene Location: 1810934-1811365 bp Feature: gene Location: 1811251-1812735 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1811653-1812343 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 81 1 653-1 81 2343 bp Feature: gene Location: 1812789-1813022 bp Feature: gene Location: 1813156-1815660 bp Feature: domain Description: SGNH_hydrolase_peri1 Location: 1815175-1815607 bp Feature: domain Description: SGNH_hydrolase_peri1 Location: 1 81 51 75-1 81 5607 bp Feature: gene Location: 2210921-2212090 bp Feature: domain Description: dacD Location: 2210930-2212085 bp Feature: domain Description: dacD Location: 221 0930-221 2085 bp Feature: gene Location: 2212323-2212556 bp Feature: gene Location: 2212610-2214094 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2213012-2213702 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 221 301 2-221 3702 bp Feature: gene Location: 2214176-2214532 bp Feature: domain Description: PRK10016 Location: 2214179-2214527 bp Feature: domain Description: PRK1 001 6 Location: 221 41 79-221 4527 bp Feature: gene Location: 2214733-2215806 bp Feature: domain Description: YccC Location: 2214754-2215792 bp Feature: domain Description: YccC Location: 221 4754-221 5792 bp Feature: gene Location: 3372158-3372577 bp Feature: domain Description: PRK10276 Location: 3372161-3372572 bp Feature: domain Description: PRK1 0276 Location: 33721 61 -3372572 bp Feature: gene Location: 3372695-3372928 bp Feature: gene Location: 3372982-3374466 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3373384-3374074 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3373384-3374074 bp Feature: gene Location: 3374596-3374742 bp Feature: gene Location: 3374757-3374999 bp Feature: domain Description: DinI Location: 3374808-3374988 bp Feature: domain Description: DinI Location: 3374808-3374988 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SGNH_hydrolase_peri1 (cd01825), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), PRK05433 (GTP-binding protein LepA; Provisional), dacD (PRK11397), PRK10016 (DNA gyrase inhibitor SbmC), YccC (COG1289), DinI (pfam06183)

Seq: UFQY01000004.1 Klebsiella pneumoniae strain NCTC13694 genome assembly, contig: ERS1058921SCcontig000004, whole genome shotgun sequence (235445 bp)
Overview 1 RT 1: 194994-200346 bp Neighborhood of RT #1 [194994, 200483] umuC PRK10276 RVT-GII StbA Plasmid_stab_B Plasmid_stab_B Feature: gene Location: 194994-196265 bp Feature: domain Description: umuC Location: 194997-196257 bp Feature: domain Description: umuC Location: 194997-1962 57 bp Feature: gene Location: 196265-196972 bp Feature: domain Description: PRK10276 Location: 196592-196955 bp Feature: domain Description: PRK102 76 Location: 196592 -196955 bp Feature: gene Location: 197102-198589 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 197507-198197 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 197507-198197 bp Feature: gene Location: 198838-199809 bp Feature: domain Description: StbA Location: 198841-199786 bp Feature: domain Description: StbA Location: 198841-199786 bp Feature: gene Location: 199812-200483 bp Feature: domain Description: Plasmid_stab_B Location: 199827-200034 bp Feature: domain Description: Plasmid_stab_B Location: 19982 7-2 00034 bp Feature: domain Description: Plasmid_stab_B Location: 200139-200346 bp Feature: domain Description: Plasmid_stab_B Location: 2 00139-2 00346 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, StbA (pfam06406), Plasmid_stab_B (pfam10784)

Seq: UFQY01000002.1 Klebsiella pneumoniae strain NCTC13694 genome assembly, contig: ERS1058921SCcontig000002, whole genome shotgun sequence (96774 bp)
Overview 1 RT 1: 41606-46028 bp Neighborhood of RT #1 [41606, 46042] RVT-GII Cloacin E2R135 Cytotoxic Cloacin_immun Feature: gene Location: 41606-41851 bp Feature: gene Location: 42211-42444 bp Feature: gene Location: 42495-43982 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 42900-43590 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 42900-43 590 bp Feature: gene Location: 44087-45775 bp Feature: domain Description: Cloacin Location: 44216-45044 bp Feature: domain Description: Cloacin Location: 44216-45044 bp Feature: domain Description: E2R135 Location: 45053-45458 bp Feature: domain Description: E2R13 5 Location: 45053 -45458 bp Feature: domain Description: Cytotoxic Location: 45512-45764 bp Feature: domain Description: Cytotoxic Location: 45512-45764 bp Feature: gene Location: 45785-46042 bp Feature: domain Description: Cloacin_immun Location: 45791-46028 bp Feature: domain Description: Cloacin_immun Location: 45791-46028 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Cloacin (pfam03515), E2R135 (pfam11570), Cytotoxic (pfam09000), Cloacin_immun (pfam03513)