myRT

myRT report for GCA_900461555.1_51485_A02

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Seq: UGOX01000001.1 Legionella quinlivanii strain NCTC12433 genome assembly, contig: ERS1374883SCcontig000001, whole genome shotgun sequence (3506419 bp)
Overview 1 RT 1: 508142-510681 bp 2 RT 2: 514277-517727 bp Neighborhood of RT #1 [508142, 510701] HTH_17 DUF927 RVT-UG2 PRK09409 PRK09413 Neighborhood of RT #2 [514277, 517744] DUF2188 RVT-UG2 PRK09413 PRK09409 Feature: gene Location: 508142-508417 bp Ori: STY09988.1 Feature: domain Description: HTH_17 Location: 508232-508361 bp Feature: domain Description: HTH_1 7 Location: 508232-508361 bp Feature: gene Location: 508483-509136 bp Ori: STY09989.1 Feature: domain Description: DUF927 Location: 508564-509029 bp Feature: domain Description: DUF927 Location: 508564-509029 bp Feature: gene Location: 509177-509413 bp Ori: STY09990.1 Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 509180-509384 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 5091 80-509384 bp Feature: gene Location: 509482-510249 bp Ori: STY09991.1 Feature: domain Description: PRK09409 Location: 509512-510232 bp Feature: domain Description: PRK09409 Location: 50951 2-51 0232 bp Feature: gene Location: 510309-510701 bp Ori: STY09992.1 Feature: domain Description: PRK09413 Location: 510354-510681 bp Feature: domain Description: PRK0941 3 Location: 51 0354-51 0681 bp Feature: gene Location: 514277-515125 bp Feature: gene Location: 515163-515399 bp Ori: STY09998.1 Feature: domain Description: DUF2188 Location: 515187-515364 bp Feature: domain Description: DUF21 88 Location: 51 51 87-51 5364 bp Feature: gene Location: 515743-516462 bp Ori: STY09999.1 Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 515932-516457 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 51 5932-51 6457 bp Feature: gene Location: 516525-516917 bp Ori: STY10000.1 Feature: domain Description: PRK09413 Location: 516570-516897 bp Feature: domain Description: PRK0941 3 Location: 51 6570-51 6897 bp Feature: gene Location: 516977-517744 bp Ori: STY10001.1 Feature: domain Description: PRK09409 Location: 517007-517727 bp Feature: domain Description: PRK09409 Location: 51 7007-51 7727 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_17 (pfam12728), DUF927 (pfam06048), RVT-UG2, PRK09409 (IS2 transposase TnpB; Reviewed), PRK09413 (IS2 repressor TnpA; Reviewed), DUF2188 (pfam09954)