myRT

myRT report for GCA_900468605.1_AFS037725

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Seq: UBUG01000058.1 Rhizobiales bacterium isolate AFS037725 genome assembly, contig: contig_58, whole genome shotgun sequence (9584 bp)
Overview 1 RT 1: 6486-8795 bp Neighborhood of RT #1 [6486, 9568] SIR2_2 RVT-Retrons Feature: gene Location: 6486-6662 bp Feature: gene Location: 6705-7733 bp Feature: domain Description: SIR2_2 Location: 7200-7515 bp Feature: domain Description: SIR2_2 Location: 7200-751 5 bp Feature: gene Location: 8006-9568 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 8162-8795 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 81 62-8795 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SIR2_2 (pfam13289), RVT-Retrons

Seq: UBUG01000010.1 Rhizobiales bacterium isolate AFS037725 genome assembly, contig: contig_10, whole genome shotgun sequence (150351 bp)
Overview 1 RT 1: 4698-12615 bp Neighborhood of RT #1 [4698, 12620] HTH_XRE PRK14975 RVT-UG9 TadG VWA PRK10426 Feature: gene Location: 4698-5315 bp Feature: domain Description: HTH_XRE Location: 5103-5259 bp Feature: domain Description: HTH_XRE Location: 5103-52 59 bp Feature: gene Location: 5405-6994 bp Feature: domain Description: PRK14975 Location: 5810-6977 bp Feature: domain Description: PRK14975 Location: 5810-6977 bp Feature: gene Location: 6987-8648 bp Feature: RT Description: RVT-UG9 Note: UG9 RT Location: 7194-7842 bp Feature: RT Description: RVT-UG9 Note: UG9 RT Location: 7194-7842 bp Feature: gene Location: 9314-10603 bp Feature: domain Description: TadG Location: 9320-9512 bp Feature: domain Description: TadG Location: 932 0-9512 bp Feature: domain Description: VWA Location: 9767-10403 bp Feature: domain Description: VWA Location: 9767-10403 bp Feature: gene Location: 10626-12620 bp Feature: domain Description: PRK10426 Location: 10632-12615 bp Feature: domain Description: PRK1042 6 Location: 10632 -12 615 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_XRE (smart00530), PRK14975 (bifunctional 3'-5' exonuclease/DNA polymerase; Provisional), RVT-UG9, TadG (COG4961), VWA (smart00327), PRK10426 (alpha-glucosidase; Provisional)

Seq: UBUG01000001.1 Rhizobiales bacterium isolate AFS037725 genome assembly, contig: contig_1, whole genome shotgun sequence (426069 bp)
Overview 1 RT 1: 416988-419645 bp Neighborhood of RT #1 [416988, 420028] HTH_XRE RVT-Retrons AbiJ_NTD4 Feature: gene Location: 416988-417122 bp Feature: gene Location: 417160-417483 bp Feature: domain Description: HTH_XRE Location: 417196-417358 bp Feature: domain Description: HTH_XRE Location: 417196-4173 58 bp Feature: gene Location: 417473-418528 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 417662-418169 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 417662-418169 bp Feature: gene Location: 418777-418962 bp Feature: gene Location: 419006-420028 bp Feature: domain Description: AbiJ_NTD4 Location: 419018-419645 bp Feature: domain Description: AbiJ_NTD4 Location: 419018-419645 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_XRE (smart00530), RVT-Retrons, AbiJ_NTD4 (pfam18863)

Seq: UBUG01000009.1 Rhizobiales bacterium isolate AFS037725 genome assembly, contig: contig_9, whole genome shotgun sequence (207750 bp)
Overview 1 RT 1: 1214-6517 bp Neighborhood of RT #1 [1214, 6534] Exo_endo_phos RVT-G2L4 AraJ AcyC Feature: gene Location: 1214-1705 bp Feature: gene Location: 1698-2627 bp Feature: domain Description: Exo_endo_phos Location: 1845-2262 bp Feature: domain Description: Exo_endo_phos Location: 184 5-2262 bp Feature: gene Location: 2700-4073 bp Feature: RT Description: RVT-G2L4 Note: G2L4 RT Location: 2964-3600 bp Feature: RT Description: RVT-G2L4 Note: G2L4 RT Location: 2964 -3600 bp Feature: gene Location: 4841-6049 bp Feature: domain Description: AraJ Location: 4901-6041 bp Feature: domain Description: AraJ Location: 4 901-604 1 bp Feature: gene Location: 6202-6534 bp Feature: domain Description: AcyC Location: 6205-6517 bp Feature: domain Description: AcyC Location: 6205-6517 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Exo_endo_phos (pfam03372), RVT-G2L4, AraJ (COG2814), AcyC (COG2114)