myRT

myRT report for GCA_900469165.1_AFS044810

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Seq: UBWD01000071.1 Rhizobiales bacterium isolate AFS044810 genome assembly, contig: contig_71, whole genome shotgun sequence (4635 bp)
Overview 1 RT 1: 1523-4595 bp Neighborhood of RT #1 [1523, 4633] rve RVT-GII GIIM PHA02517 Feature: gene Location: 1523-1723 bp Feature: gene Location: 1763-3259 bp Feature: domain Description: rve Location: 2258-2597 bp Feature: domain Description: rve Location: 2258-2597 bp Feature: gene Location: 3514-4377 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3520-3856 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3520-3856 bp Feature: domain Description: GIIM Note: maturase Location: 3928-4156 bp Feature: domain Description: GIIM Note: maturase Location: 3928-41 56 bp Feature: gene Location: 4457-4633 bp Feature: domain Description: PHA02517 Location: 4463-4595 bp Feature: domain Description: PHA0251 7 Location: 4463-4595 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT rve (pfam00665), RVT-GII, GIIM (pfam08388), PHA02517 (putative transposase OrfB; Reviewed)

Seq: UBWD01000001.1 Rhizobiales bacterium isolate AFS044810 genome assembly, contig: contig_1, whole genome shotgun sequence (181729 bp)
Overview 1 RT 1: 3-2183 bp Neighborhood of RT #1 [3, 2326] PHA02517 RVT-GII GIIM TnpB_IS66 HTH_Tnp_1 Feature: gene Location: 3-179 bp Feature: domain Description: PHA02517 Location: 12-147 bp Feature: domain Description: PHA02 517 Location: 12 -147 bp Feature: gene Location: 259-1422 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 262-901 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 62 -901 bp Feature: domain Description: GIIM Note: maturase Location: 973-1201 bp Feature: domain Description: GIIM Note: maturase Location: 973-12 01 bp Feature: gene Location: 1710-2006 bp Feature: domain Description: TnpB_IS66 Location: 1719-1974 bp Feature: domain Description: TnpB_IS66 Location: 1719-1974 bp Feature: gene Location: 2018-2326 bp Feature: domain Description: HTH_Tnp_1 Location: 2039-2183 bp Feature: domain Description: HTH_Tnp_1 Location: 2 039-2 183 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TnpB_IS66 (pfam05717), HTH_Tnp_1 (pfam01527), RVT-GII, GIIM (pfam08388), PHA02517 (putative transposase OrfB; Reviewed)