myRT

myRT report for GCA_900469275.1_AFS046522

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Seq: UBWN01000003.1 Rhizobiales bacterium isolate AFS046522 genome assembly, contig: contig_3, whole genome shotgun sequence (108606 bp)
Overview 1 RT 1: 49147-51639 bp Neighborhood of RT #1 [49147, 51650] DUF2384 RP-C_C RVT-GII DAP_dppA_3 Feature: gene Location: 49147-49542 bp Feature: domain Description: DUF2384 Location: 49390-49525 bp Feature: domain Description: DUF2384 Location: 49390-49525 bp Feature: gene Location: 49715-49915 bp Feature: domain Description: RP-C_C Location: 49730-49895 bp Feature: domain Description: RP-C_C Location: 49730-49895 bp Feature: gene Location: 50094-50660 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 50205-50649 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 50205-50649 bp Feature: gene Location: 50262-50729 bp Feature: gene Location: 50850-51650 bp Feature: domain Description: DAP_dppA_3 Location: 50853-51639 bp Feature: domain Description: DAP_dppA_3 Location: 50853-51 639 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF2384 (pfam09722), RP-C_C (pfam11800), RVT-GII, DAP_dppA_3 (cd08770)

Seq: UBWN01000048.1 Rhizobiales bacterium isolate AFS046522 genome assembly, contig: contig_48, whole genome shotgun sequence (86830 bp)
Overview 1 RT 1: 36896-42582 bp Neighborhood of RT #1 [36896, 42593] SLATT_5 RVT-UG17 NHEJ_ligase_lig Feature: gene Location: 36896-37168 bp Feature: gene Location: 37757-38353 bp Feature: domain Description: SLATT_5 Location: 37763-38303 bp Feature: domain Description: SLATT_5 Location: 37763-38303 bp Feature: gene Location: 38355-39665 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 38583-39156 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 38583-39156 bp Feature: gene Location: 39864-40946 bp Feature: gene Location: 41673-42593 bp Feature: domain Description: NHEJ_ligase_lig Location: 41700-42582 bp Feature: domain Description: NHEJ_ligase_lig Location: 41700-42 582 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SLATT_5 (pfam18160), RVT-UG17, NHEJ_ligase_lig (TIGR02779)