myRT

myRT report for GCA_900469435.1_AFS048062

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Seq: UBXB01000054.1 Rhizobiales bacterium isolate AFS048062 genome assembly, contig: contig_54, whole genome shotgun sequence (13076 bp)
Overview 1 RT 1: 9978-12287 bp Neighborhood of RT #1 [9978, 13060] SIR2_2 RVT-Retrons Feature: gene Location: 9978-10154 bp Feature: gene Location: 10197-11225 bp Feature: domain Description: SIR2_2 Location: 10692-11007 bp Feature: domain Description: SIR2_2 Location: 1 0692-1 1 007 bp Feature: gene Location: 11498-13060 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 11654-12287 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 1 654-1 2287 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SIR2_2 (pfam13289), RVT-Retrons

Seq: UBXB01000040.1 Rhizobiales bacterium isolate AFS048062 genome assembly, contig: contig_40, whole genome shotgun sequence (5011 bp)
Overview 1 RT 1: 1216-4989 bp Neighborhood of RT #1 [1216, 4989] Exo_endo_phos RVT-G2L4 Feature: gene Location: 1216-1707 bp Feature: gene Location: 1700-2629 bp Feature: domain Description: Exo_endo_phos Location: 1847-2264 bp Feature: domain Description: Exo_endo_phos Location: 1847-2 2 64 bp Feature: gene Location: 2702-4573 bp Feature: RT Description: RVT-G2L4 Note: G2L4 RT Location: 3464-4100 bp Feature: RT Description: RVT-G2 L4 Note: G2 L4 RT Location: 3464-4100 bp Feature: gene Location: 4780-4989 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Exo_endo_phos (pfam03372), RVT-G2L4

Seq: UBXB01000035.1 Rhizobiales bacterium isolate AFS048062 genome assembly, contig: contig_35, whole genome shotgun sequence (149720 bp)
Overview 1 RT 1: 4698-12615 bp Neighborhood of RT #1 [4698, 12620] HTH_XRE PRK14975 RVT-UG9 TadG VWA PRK10426 Feature: gene Location: 4698-5315 bp Feature: domain Description: HTH_XRE Location: 5103-5259 bp Feature: domain Description: HTH_XRE Location: 5103 -5259 bp Feature: gene Location: 5405-6994 bp Feature: domain Description: PRK14975 Location: 5810-6977 bp Feature: domain Description: PRK14975 Location: 5810-6977 bp Feature: gene Location: 6987-8648 bp Feature: RT Description: RVT-UG9 Note: UG9 RT Location: 7194-7842 bp Feature: RT Description: RVT-UG9 Note: UG9 RT Location: 7194-7842 bp Feature: gene Location: 9314-10603 bp Feature: domain Description: TadG Location: 9320-9512 bp Feature: domain Description: TadG Location: 93 20-9512 bp Feature: domain Description: VWA Location: 9767-10403 bp Feature: domain Description: VWA Location: 9767-10403 bp Feature: gene Location: 10626-12620 bp Feature: domain Description: PRK10426 Location: 10632-12615 bp Feature: domain Description: PRK10426 Location: 1063 2-12615 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_XRE (smart00530), PRK14975 (bifunctional 3'-5' exonuclease/DNA polymerase; Provisional), RVT-UG9, TadG (COG4961), VWA (smart00327), PRK10426 (alpha-glucosidase; Provisional)

Seq: UBXB01000044.1 Rhizobiales bacterium isolate AFS048062 genome assembly, contig: contig_44, whole genome shotgun sequence (25003 bp)
Overview 1 RT 1: 7900-12125 bp Neighborhood of RT #1 [7900, 12125] SIR2-like AbiJ_NTD4 RVT-Retrons HTH_XRE Feature: gene Location: 7900-8916 bp Feature: domain Description: SIR2-like Location: 7915-8701 bp Feature: domain Description: SIR2-like Location: 7915-8701 bp Feature: gene Location: 9085-10107 bp Feature: domain Description: AbiJ_NTD4 Location: 9097-9724 bp Feature: domain Description: AbiJ_NTD4 Location: 9097-9724 bp Feature: gene Location: 10585-11640 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 10774-11281 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 10774 -11281 bp Feature: gene Location: 11630-11953 bp Feature: domain Description: HTH_XRE Location: 11666-11828 bp Feature: domain Description: HTH_XRE Location: 11666-11828 bp Feature: gene Location: 11991-12125 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SIR2-like (cd01406), AbiJ_NTD4 (pfam18863), RVT-Retrons, HTH_XRE (smart00530)