myRT

myRT report for GCA_900470585.1_AFS061820

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Seq: UCBF01000075.1 Rhizobiales bacterium isolate AFS061820 genome assembly, contig: contig_75, whole genome shotgun sequence (1166 bp)
Overview 1 RT 1: 123-1005 bp Neighborhood of RT #1 [123, 1163] RVT-GII GIIM Feature: gene Location: 123-1163 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 129-741 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 29-741 bp Feature: domain Description: GIIM Note: maturase Location: 798-1005 bp Feature: domain Description: GIIM Note: maturase Location: 798-1 005 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: UCBF01000023.1 Rhizobiales bacterium isolate AFS061820 genome assembly, contig: contig_23, whole genome shotgun sequence (223310 bp)
Overview 1 RT 1: 15455-22245 bp Neighborhood of RT #1 [15455, 22245] AcyC TolBN TPR TPR_14 RVT-UG11 Feature: gene Location: 15455-17329 bp Feature: domain Description: AcyC Location: 15488-16109 bp Feature: domain Description: AcyC Location: 15488-16109 bp Feature: domain Description: TolBN Location: 16121-16517 bp Feature: domain Description: TolBN Location: 1612 1-16517 bp Feature: domain Description: TPR Location: 16829-17096 bp Feature: domain Description: TPR Location: 1682 9-17096 bp Feature: domain Description: TPR_14 Location: 17144-17255 bp Feature: domain Description: TPR_14 Location: 17144-172 55 bp Feature: gene Location: 17642-18274 bp Feature: gene Location: 18276-19133 bp Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 18411-18849 bp Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 18411-18849 bp Feature: gene Location: 19553-20089 bp Feature: gene Location: 20170-22245 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AcyC (COG2114), TolBN (COG5616), TPR (smart00028), TPR_14 (pfam13428), RVT-UG11

Seq: UCBF01000076.1 Rhizobiales bacterium isolate AFS061820 genome assembly, contig: contig_76, whole genome shotgun sequence (18627 bp)
Overview 1 RT 1: 3-2848 bp Neighborhood of RT #1 [3, 2871] RVT-GII PRK06247 COG5480 Feature: gene Location: 3-575 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 63-465 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 63 -465 bp Feature: gene Location: 947-2323 bp Feature: domain Description: PRK06247 Location: 950-2312 bp Feature: domain Description: PRK06247 Location: 950-23 12 bp Feature: gene Location: 2383-2871 bp Feature: domain Description: COG5480 Location: 2434-2848 bp Feature: domain Description: COG5480 Location: 243 4-2848 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, PRK06247 (pyruvate kinase; Provisional), COG5480 (Uncharacterized membrane protein )

Seq: UCBF01000089.1 Rhizobiales bacterium isolate AFS061820 genome assembly, contig: contig_89, whole genome shotgun sequence (1461 bp)
Overview 1 RT 1: 642-1437 bp Neighborhood of RT #1 [642, 1460] RVT-GII Feature: gene Location: 642-1460 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 846-1437 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 84 6-14 37 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII