myRT

myRT report for GCA_900473025.1_AFS089008

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Seq: UCKG01000007.1 Rhizobiales bacterium isolate AFS089008 genome assembly, contig: contig_7, whole genome shotgun sequence (314037 bp)
Overview 1 RT 1: 110287-113539 bp 2 RT 2: 252387-262732 bp Neighborhood of RT #1 [110287, 113539] RVT-Retrons Phage_integrase Neighborhood of RT #2 [252387, 263313] SSL2 group_II_RT_mat RVT-UG1 PRK09182 YbjD YbjD Feature: gene Location: 110287-110463 bp Feature: gene Location: 110484-111437 bp Feature: gene Location: 111441-112373 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 111546-112134 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 1 1 546-1 1 21 34 bp Feature: gene Location: 112749-113318 bp Feature: domain Description: Phage_integrase Location: 112782-113268 bp Feature: domain Description: Phage_integrase Location: 1 1 2782-1 1 3268 bp Feature: gene Location: 113336-113539 bp Feature: gene Location: 252387-255686 bp Feature: domain Description: SSL2 Location: 252834-253839 bp Feature: domain Description: SSL2 Location: 252834-253839 bp Feature: gene Location: 255739-256107 bp Feature: gene Location: 256218-259907 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 256326-256590 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 256326-256590 bp Feature: RT Description: RVT-UG1 Note: UG1 RT Location: 256803-257283 bp Feature: RT Description: RVT-UG1 Note: UG1 RT Location: 256803-257283 bp Feature: gene Location: 259933-261135 bp Feature: domain Description: PRK09182 Location: 260263-261130 bp Feature: domain Description: PRK091 82 Location: 260263-261 1 30 bp Feature: gene Location: 261178-263313 bp Feature: domain Description: YbjD Location: 261181-261430 bp Feature: domain Description: YbjD Location: 261 1 81 -261 430 bp Feature: domain Description: YbjD Location: 261955-262732 bp Feature: domain Description: YbjD Location: 261 955-262732 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, Phage_integrase (pfam00589), SSL2 (COG1061), group_II_RT_mat (TIGR04416), RVT-UG1, PRK09182 (DNA polymerase III subunit epsilon; Validated), YbjD (COG3593)