myRT

myRT report for GCA_900474365.1_56772_C01

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Seq: UFAA01000001.1 Klebsiella pneumoniae strain 3189STDY6864259 genome assembly, contig: HE125SCcontig000001, whole genome shotgun sequence (5260784 bp)
Overview 1 RT 1: 764319-771187 bp 2 RT 2: 3121125-3124977 bp Neighborhood of RT #1 [764319, 771189] FimC FimD RVT-UG4 Integrase_1 INT_P4_C Neighborhood of RT #2 [3121125, 3124977] umuC PRK10276 RVT-GII Feature: gene Location: 764319-765047 bp Feature: domain Description: FimC Location: 764367-765030 bp Feature: domain Description: FimC Location: 764367-765030 bp Feature: gene Location: 765079-767688 bp Feature: domain Description: FimD Location: 765136-767677 bp Feature: domain Description: FimD Location: 7651 36-767677 bp Feature: gene Location: 767688-769766 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 768096-768540 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 768096-768540 bp Feature: gene Location: 769823-770263 bp Feature: domain Description: Integrase_1 Location: 769829-770045 bp Feature: domain Description: Integrase_1 Location: 769829-770045 bp Feature: gene Location: 770524-771189 bp Feature: domain Description: INT_P4_C Location: 770629-771187 bp Feature: domain Description: INT_P4_C Location: 770629-771 1 87 bp Feature: gene Location: 3121125-3122390 bp Feature: domain Description: umuC Location: 3121128-3122388 bp Feature: domain Description: umuC Location: 31 21 1 28-31 22388 bp Feature: gene Location: 3122393-3122812 bp Feature: domain Description: PRK10276 Location: 3122396-3122807 bp Feature: domain Description: PRK1 0276 Location: 31 22396-31 22807 bp Feature: gene Location: 3122891-3124375 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3123293-3123983 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 31 23293-31 23983 bp Feature: gene Location: 3124532-3124828 bp Feature: gene Location: 3124831-3124977 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT FimC (COG3121), FimD (COG3188), RVT-UG4, Integrase_1 (pfam12835), INT_P4_C (cd00801), umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII

Seq: UFAA01000002.1 Klebsiella pneumoniae strain 3189STDY6864259 genome assembly, contig: HE125SCcontig000002, whole genome shotgun sequence (207730 bp)
Overview 1 RT 1: 135143-138259 bp Neighborhood of RT #1 [135143, 138259] PRK10276 RVT-GII Feature: gene Location: 135143-135568 bp Feature: domain Description: PRK10276 Location: 135146-135554 bp Feature: domain Description: PRK102 76 Location: 135146-135554 bp Feature: gene Location: 135762-135974 bp Feature: gene Location: 136049-137458 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 136376-137066 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 136376-137066 bp Feature: gene Location: 137374-137922 bp Feature: gene Location: 137981-138259 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII

Seq: UFAA01000006.1 Klebsiella pneumoniae strain 3189STDY6864259 genome assembly, contig: HE125SCcontig000006, whole genome shotgun sequence (56911 bp)
Overview 1 RT 1: 11600-16622 bp 2 RT 2: 25219-35969 bp Neighborhood of RT #1 [11600, 16630] ArdC RVT-GII PRK10276 umuC Neighborhood of RT #2 [25219, 35977] InsE PHA02517 RVT-GII GIIM Phage_integrase InsE PHA02517 RVT-GII GIIM PHA02517 APH Feature: gene Location: 11600-12565 bp Feature: domain Description: ArdC Location: 11726-12560 bp Feature: domain Description: ArdC Location: 11726-12560 bp Feature: gene Location: 12697-12966 bp Feature: gene Location: 13035-14522 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13440-14130 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13 440-1413 0 bp Feature: gene Location: 14547-15359 bp Feature: domain Description: PRK10276 Location: 14979-15342 bp Feature: domain Description: PRK10276 Location: 14979-153 42 bp Feature: gene Location: 15359-16630 bp Feature: domain Description: umuC Location: 15362-16622 bp Feature: domain Description: umuC Location: 153 62-16622 bp Feature: gene Location: 25219-25503 bp Feature: domain Description: InsE Location: 25231-25492 bp Feature: domain Description: InsE Location: 2523 1-25492 bp Feature: gene Location: 25551-25970 bp Feature: domain Description: PHA02517 Location: 25566-25905 bp Feature: domain Description: PHA02517 Location: 25566-25905 bp Feature: gene Location: 26562-28085 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 26835-27567 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2683 5-27567 bp Feature: domain Description: GIIM Note: maturase Location: 27642-27840 bp Feature: domain Description: GIIM Note: maturase Location: 27642-27840 bp Feature: gene Location: 28396-29055 bp Feature: domain Description: Phage_integrase Location: 28471-29029 bp Feature: domain Description: Phage_integrase Location: 28471-29029 bp Feature: gene Location: 29097-29840 bp Feature: gene Location: 31662-31946 bp Feature: domain Description: InsE Location: 31674-31935 bp Feature: domain Description: InsE Location: 3 1674-3 193 5 bp Feature: gene Location: 31994-32413 bp Feature: domain Description: PHA02517 Location: 32009-32348 bp Feature: domain Description: PHA02517 Location: 3 2009-3 23 48 bp Feature: gene Location: 33005-34528 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 33278-34010 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 3 278-3 4010 bp Feature: domain Description: GIIM Note: maturase Location: 34085-34283 bp Feature: domain Description: GIIM Note: maturase Location: 3 4085-3 4283 bp Feature: gene Location: 34738-35067 bp Feature: domain Description: PHA02517 Location: 34741-35059 bp Feature: domain Description: PHA02517 Location: 3 4741-3 5059 bp Feature: gene Location: 34988-35977 bp Feature: domain Description: APH Location: 35216-35969 bp Feature: domain Description: APH Location: 3 5216-3 5969 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ArdC (COG4227), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), umuC (PRK03609), InsE (COG2963), PHA02517 (putative transposase OrfB; Reviewed), GIIM (pfam08388), Phage_integrase (pfam00589), APH (pfam01636)