myRT

myRT report for GCA_900474395.1_56772_B01

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Seq: UFAE01000001.1 Klebsiella pneumoniae strain 3189STDY6864257 genome assembly, contig: HE016SCcontig000001, whole genome shotgun sequence (5457034 bp)
Overview 1 RT 1: 769363-776231 bp Neighborhood of RT #1 [769363, 776233] FimC FimD RVT-UG4 Integrase_1 INT_P4_C Feature: gene Location: 769363-770091 bp Feature: domain Description: FimC Location: 769396-770074 bp Feature: domain Description: FimC Location: 769396-770074 bp Feature: gene Location: 770123-772732 bp Feature: domain Description: FimD Location: 770180-772721 bp Feature: domain Description: FimD Location: 7701 80-772721 bp Feature: gene Location: 772732-774810 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 773140-773584 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 7731 40-773584 bp Feature: gene Location: 774867-775307 bp Feature: domain Description: Integrase_1 Location: 774873-775089 bp Feature: domain Description: Integrase_1 Location: 774873-775089 bp Feature: gene Location: 775568-776233 bp Feature: domain Description: INT_P4_C Location: 775673-776231 bp Feature: domain Description: INT_P4_C Location: 775673-776231 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT FimC (COG3121), FimD (COG3188), RVT-UG4, Integrase_1 (pfam12835), INT_P4_C (cd00801)

Seq: UFAE01000002.1 Klebsiella pneumoniae strain 3189STDY6864257 genome assembly, contig: HE016SCcontig000002, whole genome shotgun sequence (325723 bp)
Overview 1 RT 1: 98540-101834 bp 2 RT 2: 155267-159086 bp Neighborhood of RT #1 [98540, 101848] RVT-GII PRK10276 Neighborhood of RT #2 [155267, 159086] InsE PHA02517 RVT-GII GIIM PHA02517 Feature: gene Location: 98540-98755 bp Feature: gene Location: 99022-99252 bp Feature: gene Location: 99486-101021 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 99891-100629 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 99891-10062 9 bp Feature: gene Location: 101072-101305 bp Feature: gene Location: 101423-101848 bp Feature: domain Description: PRK10276 Location: 101426-101834 bp Feature: domain Description: PRK102 76 Location: 10142 6-101834 bp Feature: gene Location: 155267-155566 bp Feature: domain Description: InsE Location: 155276-155558 bp Feature: domain Description: InsE Location: 1552 76-155558 bp Feature: gene Location: 155596-156021 bp Feature: domain Description: PHA02517 Location: 155620-155956 bp Feature: domain Description: PHA02 517 Location: 15562 0-155956 bp Feature: gene Location: 156613-158136 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 156886-157618 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 156886-157618 bp Feature: domain Description: GIIM Note: maturase Location: 157693-157891 bp Feature: domain Description: GIIM Note: maturase Location: 157693-157891 bp Feature: gene Location: 158301-158705 bp Feature: domain Description: PHA02517 Location: 158304-158694 bp Feature: domain Description: PHA02 517 Location: 158304-158694 bp Feature: gene Location: 158880-159086 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), InsE (COG2963), PHA02517 (putative transposase OrfB; Reviewed), GIIM (pfam08388)