myRT

myRT report for GCA_900480735.1_17870_4_42

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Seq: UDBV01000017.1 Escherichia coli strain VRES0437 genome assembly, contig: ERS784534SCcontig000017, whole genome shotgun sequence (38648 bp)
Overview 1 RT 1: 31934-35105 bp Neighborhood of RT #1 [31934, 35107] PRK10276 RVT-GII DDE_Tnp_IS1 Feature: gene Location: 31934-32617 bp Feature: domain Description: PRK10276 Location: 32237-32600 bp Feature: domain Description: PRK1 0276 Location: 32237-32600 bp Feature: gene Location: 32671-33273 bp Feature: gene Location: 33248-34258 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 33254-33866 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 33254-33866 bp Feature: gene Location: 34381-34593 bp Feature: gene Location: 34604-35107 bp Feature: domain Description: DDE_Tnp_IS1 Location: 34715-35105 bp Feature: domain Description: DDE_Tnp_IS1 Location: 3471 5-351 05 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, DDE_Tnp_IS1 (pfam03400)

Seq: UDBV01000008.1 Escherichia coli strain VRES0437 genome assembly, contig: ERS784534SCcontig000008, whole genome shotgun sequence (285883 bp)
Overview 1 RT 1: 223455-233028 bp Neighborhood of RT #1 [223455, 233042] Phage_GPA RVT-AbiP2 RVT-Retrons Q P Feature: gene Location: 223455-225731 bp Feature: domain Description: Phage_GPA Location: 223854-224841 bp Feature: domain Description: Phage_GPA Location: 2 2 3854-2 2 4841 bp Feature: gene Location: 225793-226053 bp Feature: gene Location: 226219-227763 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 226636-227089 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 2 2 6636-2 2 7089 bp Feature: gene Location: 228314-229504 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 228464-229046 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2 2 8464-2 2 9046 bp Feature: gene Location: 230251-231270 bp Feature: domain Description: Q Location: 230254-231265 bp Feature: domain Description: Q Location: 2 302 54-2 312 65 bp Feature: gene Location: 231270-233042 bp Feature: domain Description: P Location: 231297-233028 bp Feature: domain Description: P Location: 2 312 97-2 3302 8 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Phage_GPA (pfam05840), RVT-AbiP2, RVT-Retrons, Q (PHA02536), P (PHA02535)

Seq: UDBV01000007.1 Escherichia coli strain VRES0437 genome assembly, contig: ERS784534SCcontig000007, whole genome shotgun sequence (288921 bp)
Overview 1 RT 1: 224093-227359 bp Neighborhood of RT #1 [224093, 227424] PHA02517 RVT-GII GIIM PHA02517 Feature: gene Location: 224093-224263 bp Feature: gene Location: 224291-224707 bp Feature: domain Description: PHA02517 Location: 224294-224699 bp Feature: domain Description: PHA02517 Location: 224294-224699 bp Feature: gene Location: 224830-226353 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 225103-225835 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 225103 -22583 5 bp Feature: domain Description: GIIM Note: maturase Location: 225910-226108 bp Feature: domain Description: GIIM Note: maturase Location: 225910-226108 bp Feature: gene Location: 226307-226732 bp Feature: gene Location: 226945-227424 bp Feature: domain Description: PHA02517 Location: 227005-227359 bp Feature: domain Description: PHA02517 Location: 227005-2273 59 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388)