myRT

myRT report for GCA_900480775.1_17870_4_47

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Seq: UDCE01000019.1 Escherichia coli strain VRES0443 genome assembly, contig: ERS784542SCcontig000019, whole genome shotgun sequence (39055 bp)
Overview 1 RT 1: 31934-35105 bp Neighborhood of RT #1 [31934, 35107] PRK10276 RVT-GII DDE_Tnp_IS1 Feature: gene Location: 31934-32617 bp Feature: domain Description: PRK10276 Location: 32237-32600 bp Feature: domain Description: PRK1 0276 Location: 32237-32600 bp Feature: gene Location: 32671-33273 bp Feature: gene Location: 33248-34258 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 33254-33866 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 33254-33866 bp Feature: gene Location: 34381-34593 bp Feature: gene Location: 34604-35107 bp Feature: domain Description: DDE_Tnp_IS1 Location: 34715-35105 bp Feature: domain Description: DDE_Tnp_IS1 Location: 3471 5-351 05 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, DDE_Tnp_IS1 (pfam03400)

Seq: UDCE01000002.1 Escherichia coli strain VRES0443 genome assembly, contig: ERS784542SCcontig000002, whole genome shotgun sequence (802448 bp)
Overview 1 RT 1: 61172-64829 bp Neighborhood of RT #1 [61172, 64829] InsE PHA02517 RVT-GII GIIM PHA02517 Feature: gene Location: 61172-61498 bp Feature: domain Description: InsE Location: 61175-61496 bp Feature: domain Description: InsE Location: 61175-61496 bp Feature: gene Location: 61498-61977 bp Feature: domain Description: PHA02517 Location: 61558-61912 bp Feature: domain Description: PHA02 517 Location: 61558-61912 bp Feature: gene Location: 62569-64092 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 62842-63574 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 62 842 -63574 bp Feature: domain Description: GIIM Note: maturase Location: 63649-63847 bp Feature: domain Description: GIIM Note: maturase Location: 63649-63847 bp Feature: gene Location: 64215-64631 bp Feature: domain Description: PHA02517 Location: 64218-64623 bp Feature: domain Description: PHA02 517 Location: 642 18-6462 3 bp Feature: gene Location: 64659-64829 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsE (COG2963), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388)

Seq: UDCE01000008.1 Escherichia coli strain VRES0443 genome assembly, contig: ERS784542SCcontig000008, whole genome shotgun sequence (288431 bp)
Overview 1 RT 1: 226005-235578 bp Neighborhood of RT #1 [226005, 235592] Phage_GPA RVT-AbiP2 RVT-Retrons Q P Feature: gene Location: 226005-228281 bp Feature: domain Description: Phage_GPA Location: 226404-227391 bp Feature: domain Description: Phage_GPA Location: 226404-2273 91 bp Feature: gene Location: 228343-228603 bp Feature: gene Location: 228769-230313 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 229186-229639 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 229186-22963 9 bp Feature: gene Location: 230864-232054 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 231014-231596 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 23 1014-23 1596 bp Feature: gene Location: 232801-233820 bp Feature: domain Description: Q Location: 232804-233815 bp Feature: domain Description: Q Location: 23 2804-23 3 815 bp Feature: gene Location: 233820-235592 bp Feature: domain Description: P Location: 233847-235578 bp Feature: domain Description: P Location: 23 3 847-23 5578 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Phage_GPA (pfam05840), RVT-AbiP2, RVT-Retrons, Q (PHA02536), P (PHA02535)