myRT

myRT report for GCA_900480935.1_17870_4_44

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Seq: UDCZ01000002.1 Escherichia coli strain VRES0439 genome assembly, contig: ERS784537SCcontig000002, whole genome shotgun sequence (804613 bp)
Overview 1 RT 1: 737620-740886 bp Neighborhood of RT #1 [737620, 740951] PHA02517 RVT-GII GIIM PHA02517 Feature: gene Location: 737620-737790 bp Feature: gene Location: 737818-738234 bp Feature: domain Description: PHA02517 Location: 737821-738226 bp Feature: domain Description: PHA0251 7 Location: 737821 -738226 bp Feature: gene Location: 738357-739880 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 738630-739362 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 738630-739362 bp Feature: domain Description: GIIM Note: maturase Location: 739437-739635 bp Feature: domain Description: GIIM Note: maturase Location: 739437-739635 bp Feature: gene Location: 739834-740259 bp Feature: gene Location: 740472-740951 bp Feature: domain Description: PHA02517 Location: 740532-740886 bp Feature: domain Description: PHA0251 7 Location: 740532-740886 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388)

Seq: UDCZ01000013.1 Escherichia coli strain VRES0439 genome assembly, contig: ERS784537SCcontig000013, whole genome shotgun sequence (119008 bp)
Overview 1 RT 1: 49559-52730 bp Neighborhood of RT #1 [49559, 52732] PRK10276 RVT-GII InsA DDE_Tnp_IS1 Feature: gene Location: 49559-50242 bp Feature: domain Description: PRK10276 Location: 49862-50225 bp Feature: domain Description: PRK102 76 Location: 49862 -502 2 5 bp Feature: gene Location: 50296-50898 bp Feature: gene Location: 50873-51883 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 50879-51491 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 50879-51491 bp Feature: gene Location: 52035-52310 bp Feature: domain Description: InsA Location: 52038-52302 bp Feature: domain Description: InsA Location: 52 038-52 302 bp Feature: gene Location: 52229-52732 bp Feature: domain Description: DDE_Tnp_IS1 Location: 52340-52730 bp Feature: domain Description: DDE_Tnp_IS1 Location: 52 340-52 730 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, InsA (COG3677), DDE_Tnp_IS1 (pfam03400)

Seq: UDCZ01000008.1 Escherichia coli strain VRES0439 genome assembly, contig: ERS784537SCcontig000008, whole genome shotgun sequence (285875 bp)
Overview 1 RT 1: 54604-61391 bp Neighborhood of RT #1 [54604, 62281] Q RVT-Retrons RVT-AbiP2 Phage_GPA Feature: gene Location: 54604-55623 bp Feature: domain Description: Q Location: 54607-55618 bp Feature: domain Description: Q Location: 54607-55618 bp Feature: gene Location: 55666-56373 bp Feature: gene Location: 56370-57560 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 56520-57102 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 56520-57102 bp Feature: gene Location: 58111-59655 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 58528-58981 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 58528-58981 bp Feature: gene Location: 59821-60081 bp Feature: gene Location: 60143-62281 bp Feature: domain Description: Phage_GPA Location: 60404-61391 bp Feature: domain Description: Phage_GPA Location: 60404-613 91 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Q (PHA02536), RVT-Retrons, RVT-AbiP2, Phage_GPA (pfam05840)