myRT

myRT report for GCA_900481105.1_17870_4_46

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Seq: UDDI01000002.1 Escherichia coli strain VRES0440 genome assembly, contig: ERS784540SCcontig000002, whole genome shotgun sequence (802448 bp)
Overview 1 RT 1: 737620-740886 bp Neighborhood of RT #1 [737620, 740951] PHA02517 RVT-GII GIIM PHA02517 Feature: gene Location: 737620-737790 bp Feature: gene Location: 737818-738234 bp Feature: domain Description: PHA02517 Location: 737821-738226 bp Feature: domain Description: PHA0251 7 Location: 737821 -738226 bp Feature: gene Location: 738357-739880 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 738630-739362 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 738630-739362 bp Feature: domain Description: GIIM Note: maturase Location: 739437-739635 bp Feature: domain Description: GIIM Note: maturase Location: 739437-739635 bp Feature: gene Location: 739834-740259 bp Feature: gene Location: 740472-740951 bp Feature: domain Description: PHA02517 Location: 740532-740886 bp Feature: domain Description: PHA0251 7 Location: 740532-740886 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388)

Seq: UDDI01000015.1 Escherichia coli strain VRES0440 genome assembly, contig: ERS784540SCcontig000015, whole genome shotgun sequence (78764 bp)
Overview 1 RT 1: 31936-35107 bp Neighborhood of RT #1 [31936, 35109] PRK10276 RVT-GII DDE_Tnp_IS1 Feature: gene Location: 31936-32619 bp Feature: domain Description: PRK10276 Location: 32239-32602 bp Feature: domain Description: PRK102 76 Location: 32 2 39-32 602 bp Feature: gene Location: 32673-33275 bp Feature: gene Location: 33250-34260 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 33256-33868 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 332 56-33868 bp Feature: gene Location: 34383-34595 bp Feature: gene Location: 34606-35109 bp Feature: domain Description: DDE_Tnp_IS1 Location: 34717-35107 bp Feature: domain Description: DDE_Tnp_IS1 Location: 34717-35107 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, DDE_Tnp_IS1 (pfam03400)

Seq: UDDI01000008.1 Escherichia coli strain VRES0440 genome assembly, contig: ERS784540SCcontig000008, whole genome shotgun sequence (285886 bp)
Overview 1 RT 1: 223457-233030 bp Neighborhood of RT #1 [223457, 233044] Phage_GPA RVT-AbiP2 RVT-Retrons Q P Feature: gene Location: 223457-225733 bp Feature: domain Description: Phage_GPA Location: 223856-224843 bp Feature: domain Description: Phage_GPA Location: 223 856-224843 bp Feature: gene Location: 225795-226055 bp Feature: gene Location: 226221-227765 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 226638-227091 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 22663 8-227091 bp Feature: gene Location: 228316-229506 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 228466-229048 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 228466-229048 bp Feature: gene Location: 230253-231272 bp Feature: domain Description: Q Location: 230256-231267 bp Feature: domain Description: Q Location: 23 0256-23 1267 bp Feature: gene Location: 231272-233044 bp Feature: domain Description: P Location: 231299-233030 bp Feature: domain Description: P Location: 23 1299-23 3 03 0 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Phage_GPA (pfam05840), RVT-AbiP2, RVT-Retrons, Q (PHA02536), P (PHA02535)