myRT

myRT report for GCA_900481905.1_17651_3_63

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Seq: UDGH01000011.1 Escherichia coli strain VREC0523 genome assembly, contig: ERS791659SCcontig000011, whole genome shotgun sequence (173659 bp)
Overview 1 RT 1: 100540-106783 bp Neighborhood of RT #1 [100540, 106806] HTH_19 COG3617 RVT-Retrons PBP2_CrgA_like_5 XdhC Feature: gene Location: 100540-100839 bp Feature: domain Description: HTH_19 Location: 100552-100690 bp Feature: domain Description: HTH_1 9 Location: 1 00552-1 00690 bp Feature: gene Location: 101224-101985 bp Feature: domain Description: COG3617 Location: 101278-101665 bp Feature: domain Description: COG361 7 Location: 1 01 278-1 01 665 bp Feature: gene Location: 103266-104165 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 103281-103710 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 03281 -1 0371 0 bp Feature: gene Location: 105461-105871 bp Feature: domain Description: PBP2_CrgA_like_5 Location: 105533-105845 bp Feature: domain Description: PBP2_CrgA_like_5 Location: 1 05533-1 05845 bp Feature: gene Location: 105850-106806 bp Feature: domain Description: XdhC Location: 105931-106783 bp Feature: domain Description: XdhC Location: 1 05931 -1 06783 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_19 (pfam12844), COG3617 (Prophage antirepressor ), RVT-Retrons, PBP2_CrgA_like_5 (cd08474), XdhC (COG1975)