myRT

myRT report for GCA_900484545.1_19646_6_88

Download annotations/find similar RTs

Seq: UDPX01000132.1 Shigella flexneri 2a strain 4028STDY6330052 genome assembly, contig: ERS1078913SCcontig000132, whole genome shotgun sequence (9139 bp)
Overview 1 RT 1: 4849-8749 bp Neighborhood of RT #1 [4849, 8814] INT_P4_C PHA02517 RVT-GII GIIM PHA02517 Feature: gene Location: 4849-5598 bp Feature: domain Description: INT_P4_C Location: 4954-5536 bp Feature: domain Description: INT_P4_C Location: 4954-5536 bp Feature: gene Location: 5705-6109 bp Feature: domain Description: PHA02517 Location: 5708-6098 bp Feature: domain Description: PHA0251 7 Location: 5708-6098 bp Feature: gene Location: 6274-7797 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6547-7279 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6547-7279 bp Feature: domain Description: GIIM Note: maturase Location: 7354-7552 bp Feature: domain Description: GIIM Note: maturase Location: 7354-7552 bp Feature: gene Location: 7751-8176 bp Feature: gene Location: 8389-8814 bp Feature: domain Description: PHA02517 Location: 8413-8749 bp Feature: domain Description: PHA0251 7 Location: 841 3-8749 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT INT_P4_C (cd00801), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388)