myRT

myRT report for GCA_900484795.1_19646_6_51

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Seq: UDQS01000061.1 Shigella flexneri 2a strain 4028STDY6330014 genome assembly, contig: ERS1078874SCcontig000061, whole genome shotgun sequence (22899 bp)
Overview 1 RT 1: 13317-17985 bp Neighborhood of RT #1 [13317, 18047] InsE PHA02517 RVT-GII GIIM PHA02517 INT_P4_C Feature: gene Location: 13317-13619 bp Feature: domain Description: InsE Location: 13326-13608 bp Feature: domain Description: InsE Location: 1 3326-1 3608 bp Feature: gene Location: 13646-14425 bp Feature: domain Description: PHA02517 Location: 13670-14390 bp Feature: domain Description: PHA0251 7 Location: 1 3670-1 4390 bp Feature: gene Location: 15046-16569 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 15319-16051 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 531 9-1 6051 bp Feature: domain Description: GIIM Note: maturase Location: 16126-16324 bp Feature: domain Description: GIIM Note: maturase Location: 1 61 26-1 6324 bp Feature: gene Location: 16787-17191 bp Feature: domain Description: PHA02517 Location: 16790-17180 bp Feature: domain Description: PHA0251 7 Location: 1 6790-1 71 80 bp Feature: gene Location: 17298-18047 bp Feature: domain Description: INT_P4_C Location: 17403-17985 bp Feature: domain Description: INT_P4_C Location: 1 7403-1 7985 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsE (COG2963), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), INT_P4_C (cd00801)

Seq: UDQS01000154.1 Shigella flexneri 2a strain 4028STDY6330014 genome assembly, contig: ERS1078874SCcontig000154, whole genome shotgun sequence (5875 bp)
Overview 1 RT 1: 3225-5846 bp Neighborhood of RT #1 [3225, 5872] COG3547 RVT-GII GIIM DDE_Tnp_IS66 Feature: gene Location: 3225-3710 bp Feature: domain Description: COG3547 Location: 3243-3696 bp Feature: domain Description: COG3547 Location: 32 43-3696 bp Feature: gene Location: 3806-3973 bp Feature: gene Location: 3999-5216 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4185-4839 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4185-4839 bp Feature: domain Description: GIIM Note: maturase Location: 4917-5139 bp Feature: domain Description: GIIM Note: maturase Location: 4917-5139 bp Feature: gene Location: 5227-5610 bp Feature: gene Location: 5693-5872 bp Feature: domain Description: DDE_Tnp_IS66 Location: 5696-5846 bp Feature: domain Description: DDE_Tnp_IS66 Location: 5696-5846 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG3547 (Transposase ), RVT-GII, GIIM (pfam08388), DDE_Tnp_IS66 (pfam03050)