myRT

myRT report for GCA_900485145.1_19646_6_29

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Seq: UDRL01000005.1 Shigella sonnei strain 4028STDY6329992 genome assembly, contig: ERS1078850SCcontig000005, whole genome shotgun sequence (71371 bp)
Overview 1 RT 1: 47031-53983 bp Neighborhood of RT #1 [47031, 53983] Ail_Lom phage_tail_N Collar RVT-UG17 SLATT_5 Feature: gene Location: 47031-47630 bp Ori: SRI63305.1 Gene: ompX_2 Feature: domain Description: Ail_Lom Location: 47034-47628 bp Feature: domain Description: Ail_Lom Location: 47034-47628 bp Feature: gene Location: 47695-51093 bp Ori: SRI63306.1 Feature: domain Description: phage_tail_N Location: 47698-48097 bp Feature: domain Description: phage_tail_N Location: 47698-48097 bp Feature: domain Description: Collar Location: 50416-50554 bp Feature: domain Description: Collar Location: 5041 6-50554 bp Feature: gene Location: 51790-53160 bp Ori: SRI63307.1 Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 52018-52624 bp Feature: RT Description: RVT-UG1 7 Note: UG1 7 RT Location: 5201 8-52624 bp Feature: gene Location: 53138-53689 bp Ori: SRI63308.1 Feature: domain Description: SLATT_5 Location: 53144-53660 bp Feature: domain Description: SLATT_5 Location: 531 44-53660 bp Feature: gene Location: 53816-53983 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Ail_Lom (pfam06316), phage_tail_N (pfam08400), Collar (pfam07484), RVT-UG17, SLATT_5 (pfam18160)