myRT

myRT report for GCA_900485795.1_18787_5_17

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Seq: UIPA01000022.1 Shigella flexneri strain 4028STDY6275026 genome assembly, contig: ERS1017628SCcontig000022, whole genome shotgun sequence (54741 bp)
Overview 1 RT 1: 1618-9034 bp Neighborhood of RT #1 [1618, 9036] PHA02517 RVT-GII GIIM PHA02517 ESPR Peptidase_S6 autotrans_barl Feature: gene Location: 1618-1746 bp Feature: gene Location: 1836-2075 bp Feature: domain Description: PHA02517 Location: 1839-2010 bp Feature: domain Description: PHA0251 7 Location: 1 839-201 0 bp Feature: gene Location: 2667-4190 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2940-3672 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2940-3672 bp Feature: domain Description: GIIM Note: maturase Location: 3747-3945 bp Feature: domain Description: GIIM Note: maturase Location: 3747-3945 bp Feature: gene Location: 4367-4753 bp Feature: domain Description: PHA02517 Location: 4370-4751 bp Feature: domain Description: PHA0251 7 Location: 4370-4751 bp Feature: gene Location: 4918-9036 bp Feature: domain Description: ESPR Location: 4921-4990 bp Feature: domain Description: ESPR Location: 4921 -4990 bp Feature: domain Description: Peptidase_S6 Location: 5071-7243 bp Feature: domain Description: Peptidase_S6 Location: 5071 -7243 bp Feature: domain Description: autotrans_barl Location: 7807-9034 bp Feature: domain Description: autotrans_barl Location: 7807-9034 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), ESPR (pfam13018), Peptidase_S6 (pfam02395), autotrans_barl (TIGR01414)

Seq: UIPA01000023.1 Shigella flexneri strain 4028STDY6275026 genome assembly, contig: ERS1017628SCcontig000023, whole genome shotgun sequence (53942 bp)
Overview 1 RT 1: 49487-52188 bp Neighborhood of RT #1 [49487, 52208] GIIM RVT-GII Tra5 PAP2_acid_phosphatase Feature: gene Location: 49487-49642 bp Feature: gene Location: 49668-50039 bp Feature: domain Description: GIIM Note: maturase Location: 49746-49965 bp Feature: domain Description: GIIM Note: maturase Location: 49746-49965 bp Feature: gene Location: 50047-50850 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 50347-50842 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 50347-50842 bp Feature: gene Location: 50863-51063 bp Feature: domain Description: Tra5 Location: 50872-51046 bp Feature: domain Description: Tra5 Location: 50872 -51046 bp Feature: gene Location: 51459-52208 bp Feature: domain Description: PAP2_acid_phosphatase Location: 51534-52188 bp Feature: domain Description: PAP2 _acid_phosphatase Location: 51534-52 188 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT GIIM (pfam08388), RVT-GII, Tra5 (COG2801), PAP2_acid_phosphatase (cd03397)

Seq: UIPA01000082.1 Shigella flexneri strain 4028STDY6275026 genome assembly, contig: ERS1017628SCcontig000082, whole genome shotgun sequence (16961 bp)
Overview 1 RT 1: 14209-16862 bp Neighborhood of RT #1 [14209, 16862] COG3547 RVT-GII GIIM Feature: gene Location: 14209-14694 bp Feature: domain Description: COG3547 Location: 14227-14680 bp Feature: domain Description: COG3 547 Location: 14227-14680 bp Feature: gene Location: 14790-14957 bp Feature: gene Location: 14983-16200 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 15169-15823 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 15169-15823 bp Feature: domain Description: GIIM Note: maturase Location: 15901-16123 bp Feature: domain Description: GIIM Note: maturase Location: 15901-16123 bp Feature: gene Location: 16211-16594 bp Feature: gene Location: 16668-16862 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG3547 (Transposase ), RVT-GII, GIIM (pfam08388)