myRT

myRT report for GCA_900486285.1_18787_4_24

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Seq: UDUT01000144.1 Shigella flexneri strain 4028STDY6274937 genome assembly, contig: ERS1017566SCcontig000144, whole genome shotgun sequence (8195 bp)
Overview 1 RT 1: 1-7763 bp Neighborhood of RT #1 [1, 7783] RVT-GII GIIM PHA02517 ushA GIIM RVT-GII Tra5 PAP2_acid_phosphatase Feature: gene Location: 1-363 bp Feature: gene Location: 657-2180 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 930-1662 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 930-1 662 bp Feature: domain Description: GIIM Note: maturase Location: 1737-1935 bp Feature: domain Description: GIIM Note: maturase Location: 1 737-1 935 bp Feature: gene Location: 2357-2743 bp Feature: domain Description: PHA02517 Location: 2360-2741 bp Feature: domain Description: PHA0251 7 Location: 2360-2741 bp Feature: gene Location: 3084-4736 bp Feature: domain Description: ushA Location: 3096-4734 bp Feature: domain Description: ushA Location: 3096-4734 bp Feature: gene Location: 5062-5217 bp Feature: gene Location: 5243-5614 bp Feature: domain Description: GIIM Note: maturase Location: 5321-5540 bp Feature: domain Description: GIIM Note: maturase Location: 5321 -5540 bp Feature: gene Location: 5622-6425 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5922-6417 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5922-641 7 bp Feature: gene Location: 6438-6638 bp Feature: domain Description: Tra5 Location: 6447-6621 bp Feature: domain Description: Tra5 Location: 6447-6621 bp Feature: gene Location: 7034-7783 bp Feature: domain Description: PAP2_acid_phosphatase Location: 7109-7763 bp Feature: domain Description: PAP2_acid_phosphatase Location: 71 09-7763 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), ushA (PRK09558), RVT-GII, GIIM (pfam08388), Tra5 (COG2801), PAP2_acid_phosphatase (cd03397)

Seq: UDUT01000141.1 Shigella flexneri strain 4028STDY6274937 genome assembly, contig: ERS1017566SCcontig000141, whole genome shotgun sequence (8478 bp)
Overview 1 RT 1: 5828-8449 bp Neighborhood of RT #1 [5828, 8475] COG3547 RVT-GII GIIM DDE_Tnp_IS66 Feature: gene Location: 5828-6313 bp Feature: domain Description: COG3547 Location: 5846-6299 bp Feature: domain Description: COG3547 Location: 5846-62 99 bp Feature: gene Location: 6409-6576 bp Feature: gene Location: 6602-7819 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6788-7442 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6788-7442 bp Feature: domain Description: GIIM Note: maturase Location: 7520-7742 bp Feature: domain Description: GIIM Note: maturase Location: 752 0-7742 bp Feature: gene Location: 7830-8213 bp Feature: gene Location: 8296-8475 bp Feature: domain Description: DDE_Tnp_IS66 Location: 8299-8449 bp Feature: domain Description: DDE_Tnp_IS66 Location: 82 99-8449 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG3547 (Transposase ), RVT-GII, GIIM (pfam08388), DDE_Tnp_IS66 (pfam03050)