myRT

myRT report for GCA_900488585.1_18787_7_12

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Seq: UIQW01000002.1 Shigella sonnei strain 4028STDY6275213 genome assembly, contig: ERS1017792SCcontig000002, whole genome shotgun sequence (89434 bp)
Overview 1 RT 1: 36961-44634 bp Neighborhood of RT #1 [36961, 45176] prfC PRK10597 RVT-Retrons TIR_2 Caudo_TAP phage_tail_N ABC_SMC2_euk Collar Feature: gene Location: 36961-38547 bp Feature: domain Description: prfC Location: 36979-38545 bp Feature: domain Description: prfC Location: 36979-38545 bp Feature: gene Location: 38767-39027 bp Feature: domain Description: PRK10597 Location: 38770-39010 bp Feature: domain Description: PRK1 0597 Location: 38770-3901 0 bp Feature: gene Location: 39385-40989 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 39676-40267 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 39676-40267 bp Feature: domain Description: TIR_2 Location: 40594-40927 bp Feature: domain Description: TIR_2 Location: 40594-40927 bp Feature: gene Location: 41434-42018 bp Feature: domain Description: Caudo_TAP Location: 41650-42007 bp Feature: domain Description: Caudo_TAP Location: 41 650-42007 bp Feature: gene Location: 42018-45176 bp Feature: domain Description: phage_tail_N Location: 42021-42420 bp Feature: domain Description: phage_tail_N Location: 42021 -42420 bp Feature: domain Description: ABC_SMC2_euk Location: 42468-43449 bp Feature: domain Description: ABC_SMC2_euk Location: 42468-43449 bp Feature: domain Description: Collar Location: 44496-44634 bp Feature: domain Description: Collar Location: 44496-44634 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT prfC (TIGR00503), PRK10597 (DNA damage-inducible protein I; Provisional), RVT-Retrons, TIR_2 (pfam13676), Caudo_TAP (pfam02413), phage_tail_N (pfam08400), ABC_SMC2_euk (cd03273), Collar (pfam07484)