myRT

myRT report for GCA_900490805.1_G1555

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Seq: UENE01000005.1 Streptococcus intermedius B196 strain G1555 genome assembly, contig: contig00005, whole genome shotgun sequence (173229 bp)
Overview 1 RT 1: 158724-165797 bp Neighborhood of RT #1 [158724, 166513] ResIII SSL2 Mod RVT-GII GIIM SR_TndX_transposase Recombinase SR_TndX_transposase Recombinase Feature: gene Location: 158724-160988 bp Feature: domain Description: ResIII Location: 158727-159249 bp Feature: domain Description: ResIII Location: 1 58727-1 59249 bp Feature: domain Description: SSL2 Location: 159612-160017 bp Feature: domain Description: SSL2 Location: 1 5961 2-1 6001 7 bp Feature: gene Location: 160988-161458 bp Feature: domain Description: Mod Location: 161000-161276 bp Feature: domain Description: Mod Location: 1 61 000-1 61 276 bp Feature: gene Location: 161558-162811 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 161762-162377 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 61 762-1 62377 bp Feature: domain Description: GIIM Note: maturase Location: 162431-162662 bp Feature: domain Description: GIIM Note: maturase Location: 1 62431 -1 62662 bp Feature: gene Location: 163360-164853 bp Feature: domain Description: SR_TndX_transposase Location: 163375-163810 bp Feature: domain Description: SR_TndX_transposase Location: 1 63375-1 6381 0 bp Feature: domain Description: Recombinase Location: 163915-164293 bp Feature: domain Description: Recombinase Location: 1 6391 5-1 64293 bp Feature: gene Location: 164846-166513 bp Feature: domain Description: SR_TndX_transposase Location: 164921-165347 bp Feature: domain Description: SR_TndX_transposase Location: 1 64921 -1 65347 bp Feature: domain Description: Recombinase Location: 165467-165797 bp Feature: domain Description: Recombinase Location: 1 65467-1 65797 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ResIII (pfam04851), SSL2 (COG1061), Mod (COG2189), RVT-GII, GIIM (pfam08388), SR_TndX_transposase (cd03770), Recombinase (pfam07508)