myRT

myRT report for GCA_900492725.1_L_h_138295

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Seq: UFAM01000058.1 Legionella sp. 13.8642 strain 13.8295 genome assembly, contig: NODE_58_length_5381_cov_12.9182_ID_115, whole genome shotgun sequence (5381 bp)
Overview 1 RT 1: 1-2727 bp Neighborhood of RT #1 [1, 3095] RVT-GII GIIM DUF3800 HNH Feature: gene Location: 1-1050 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 130-502 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 30-502 bp Feature: domain Description: GIIM Note: maturase Location: 553-787 bp Feature: domain Description: GIIM Note: maturase Location: 553-787 bp Feature: gene Location: 1448-2173 bp Feature: domain Description: DUF3800 Location: 1457-2054 bp Feature: domain Description: DUF3800 Location: 1 457-2054 bp Feature: gene Location: 2520-3095 bp Feature: domain Description: HNH Note: nucleases Location: 2577-2727 bp Feature: domain Description: HNH Note: nucleases Location: 2577-2727 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), DUF3800 (pfam12686), HNH (pfam01844)

Seq: UFAM01000048.1 Legionella sp. 13.8642 strain 13.8295 genome assembly, contig: NODE_48_length_6954_cov_18.584_ID_95, whole genome shotgun sequence (6954 bp)
Overview 1 RT 1: 87-2220 bp Neighborhood of RT #1 [87, 2220] RVT_N RVT-GII Feature: gene Location: 87-722 bp Feature: domain Description: RVT_N Location: 144-387 bp Feature: domain Description: RVT_N Location: 144-387 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 432-684 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 432 -684 bp Feature: gene Location: 959-1111 bp Feature: gene Location: 1822-2220 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII

Seq: UFAM01000014.1 Legionella sp. 13.8642 strain 13.8295 genome assembly, contig: NODE_14_length_143687_cov_23.4921_ID_27, whole genome shotgun sequence (143687 bp)
Overview 1 RT 1: 97204-102708 bp Neighborhood of RT #1 [97204, 102752] CAP_ED RVT-UNC GGDEF EAL Feature: gene Location: 97204-98289 bp Feature: gene Location: 98259-98993 bp Feature: domain Description: CAP_ED Location: 98298-98604 bp Feature: domain Description: CAP_ED Location: 98298-98604 bp Feature: gene Location: 98968-100440 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 99292-99928 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 99292-99928 bp Feature: gene Location: 100671-101081 bp Feature: gene Location: 101106-102752 bp Feature: domain Description: GGDEF Location: 101451-101931 bp Feature: domain Description: GGDEF Location: 101451-10193 1 bp Feature: domain Description: EAL Location: 102006-102708 bp Feature: domain Description: EAL Location: 102006-102708 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT CAP_ED (cl00047), RVT-UG27/RVT-DGRs/RVT-CRISPR/RVT-UG26(RVT-UNC), GGDEF (TIGR00254), EAL (smart00052)