myRT

myRT report for GCA_900492895.1_22036_6_1

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Seq: UFAO01000008.1 Klebsiella pneumoniae strain 4300STDY6636933 genome assembly, contig: ERS1470092SCcontig000008, whole genome shotgun sequence (303645 bp)
Overview 1 RT 1: 264774-271642 bp Neighborhood of RT #1 [264774, 271644] FimC FimD RVT-UG4 Integrase_1 INT_P4_C Feature: gene Location: 264774-265502 bp Feature: domain Description: FimC Location: 264822-265485 bp Feature: domain Description: FimC Location: 264822-265485 bp Feature: gene Location: 265534-268143 bp Feature: domain Description: FimD Location: 265591-268132 bp Feature: domain Description: FimD Location: 265591 -2681 32 bp Feature: gene Location: 268143-270221 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 268551-268995 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 268551 -268995 bp Feature: gene Location: 270278-270718 bp Feature: domain Description: Integrase_1 Location: 270284-270500 bp Feature: domain Description: Integrase_1 Location: 270284-270500 bp Feature: gene Location: 270979-271644 bp Feature: domain Description: INT_P4_C Location: 271084-271642 bp Feature: domain Description: INT_P4_C Location: 271 084-271 642 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT FimC (COG3121), FimD (COG3188), RVT-UG4, Integrase_1 (pfam12835), INT_P4_C (cd00801)

Seq: UFAO01000013.1 Klebsiella pneumoniae strain 4300STDY6636933 genome assembly, contig: ERS1470092SCcontig000013, whole genome shotgun sequence (52325 bp)
Overview 1 RT 1: 49654-52323 bp Neighborhood of RT #1 [49654, 52323] PRK10276 RVT-GII Feature: gene Location: 49654-50337 bp Feature: domain Description: PRK10276 Location: 49957-50320 bp Feature: domain Description: PRK102 76 Location: 49957-5032 0 bp Feature: gene Location: 50391-50993 bp Feature: gene Location: 50968-51978 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 50974-51586 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 50974-51586 bp Feature: gene Location: 52090-52323 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII