myRT

myRT report for GCA_900493125.1_22036_6_55

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Seq: UFBZ01000004.1 Klebsiella pneumoniae strain 4300STDY6636992 genome assembly, contig: ERS1470151SCcontig000004, whole genome shotgun sequence (505562 bp)
Overview 1 RT 1: 26115-29178 bp Neighborhood of RT #1 [26115, 29195] PRK10724 SmpB RVT-UG11 PRK09678 Feature: gene Location: 26115-26552 bp Ori: SSH44507.1 Gene: ratA Feature: domain Description: PRK10724 Location: 26118-26547 bp Feature: domain Description: PRK1 0724 Location: 261 1 8-26547 bp Feature: gene Location: 26702-27184 bp Ori: SSH44513.1 Gene: smpB Feature: domain Description: SmpB Location: 26732-27176 bp Feature: domain Description: SmpB Location: 26732-271 76 bp Feature: gene Location: 27800-28573 bp Ori: SSH44519.1 Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 27935-28388 bp Feature: RT Description: RVT-UG1 1 Note: UG1 1 RT Location: 27935-28388 bp Feature: gene Location: 28542-28715 bp Feature: gene Location: 28977-29195 bp Ori: SSH44528.1 Feature: domain Description: PRK09678 Location: 28980-29178 bp Feature: domain Description: PRK09678 Location: 28980-291 78 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10724 (type II toxin-antitoxin system RatA family toxin), SmpB (pfam01668), RVT-UG11, PRK09678 (DNA-binding transcriptional regulator; Provisional)

Seq: UFBZ01000015.1 Klebsiella pneumoniae strain 4300STDY6636992 genome assembly, contig: ERS1470151SCcontig000015, whole genome shotgun sequence (34917 bp)
Overview 1 RT 1: 25833-30627 bp Neighborhood of RT #1 [25833, 30629] umuC PRK10276 RVT-GII Antirestrict Feature: gene Location: 25833-26882 bp Ori: SSH76252.1 Gene: umuC_3 Feature: domain Description: umuC Location: 25836-26832 bp Feature: domain Description: umuC Location: 2 5836-2 6832 bp Feature: gene Location: 26882-27307 bp Ori: SSH76253.1 Gene: umuD_2 Feature: domain Description: PRK10276 Location: 26885-27293 bp Feature: domain Description: PRK102 76 Location: 2 6885-2 72 93 bp Feature: gene Location: 27787-29220 bp Ori: SSH76254.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 28114-28828 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 8114-2 882 8 bp Feature: gene Location: 29454-29684 bp Feature: gene Location: 30204-30629 bp Ori: SSH76256.1 Feature: domain Description: Antirestrict Location: 30339-30627 bp Feature: domain Description: Antirestrict Location: 30339-3062 7 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, Antirestrict (pfam03230)