myRT

myRT report for GCA_900493455.1_22036_6_82

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Seq: UFDB01000014.1 Klebsiella pneumoniae strain 4300STDY6542368 genome assembly, contig: ERS1306187SCcontig000014, whole genome shotgun sequence (54219 bp)
Overview 1 RT 1: 51557-54217 bp Neighborhood of RT #1 [51557, 54217] PRK10276 RVT-GII Feature: gene Location: 51557-52240 bp Feature: domain Description: PRK10276 Location: 51860-52223 bp Feature: domain Description: PRK1 0276 Location: 51 860-52223 bp Feature: gene Location: 52294-52896 bp Feature: gene Location: 52871-53881 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 52877-53489 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 52877-53489 bp Feature: gene Location: 53993-54217 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII

Seq: UFDB01000002.1 Klebsiella pneumoniae strain 4300STDY6542368 genome assembly, contig: ERS1306187SCcontig000002, whole genome shotgun sequence (749117 bp)
Overview 1 RT 1: 477479-484332 bp Neighborhood of RT #1 [477479, 484349] INT_P4_C Integrase_1 RVT-UG4 FimD FimC Feature: gene Location: 477479-478144 bp Feature: domain Description: INT_P4_C Location: 477584-478142 bp Feature: domain Description: INT_P4_C Location: 477584-478142 bp Feature: gene Location: 478405-478845 bp Feature: domain Description: Integrase_1 Location: 478411-478627 bp Feature: domain Description: Integrase_1 Location: 478411-47862 7 bp Feature: gene Location: 478902-480980 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 479310-479754 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 479310-479754 bp Feature: gene Location: 480980-483589 bp Feature: domain Description: FimD Location: 481037-483578 bp Feature: domain Description: FimD Location: 481037-483578 bp Feature: gene Location: 483621-484349 bp Feature: domain Description: FimC Location: 483669-484332 bp Feature: domain Description: FimC Location: 483669-484332 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT INT_P4_C (cd00801), Integrase_1 (pfam12835), RVT-UG4, FimD (COG3188), FimC (COG3121)