myRT

myRT report for GCA_900494295.1_22036_6_356

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Seq: UFGB01000044.1 Klebsiella pneumoniae strain 4300STDY6470481 genome assembly, contig: ERS1276111SCcontig000044, whole genome shotgun sequence (676 bp)
Overview 1 RT 1: 1-646 bp Neighborhood of RT #1 [1, 675] RVT-GII Feature: gene Location: 1-675 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 34-646 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 34-646 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: UFGB01000002.1 Klebsiella pneumoniae strain 4300STDY6470481 genome assembly, contig: ERS1276111SCcontig000002, whole genome shotgun sequence (511769 bp)
Overview 1 RT 1: 265034-271902 bp Neighborhood of RT #1 [265034, 271904] FimC FimD RVT-UG4 Integrase_1 INT_P4_C Feature: gene Location: 265034-265762 bp Feature: domain Description: FimC Location: 265067-265742 bp Feature: domain Description: FimC Location: 2 65067-2 65742 bp Feature: gene Location: 265794-268403 bp Feature: domain Description: FimD Location: 265851-268392 bp Feature: domain Description: FimD Location: 2 65851-2 68392 bp Feature: gene Location: 268403-270481 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 268811-269255 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 2 68811-2 692 55 bp Feature: gene Location: 270538-270978 bp Feature: domain Description: Integrase_1 Location: 270544-270760 bp Feature: domain Description: Integrase_1 Location: 2 70544-2 70760 bp Feature: gene Location: 271239-271904 bp Feature: domain Description: INT_P4_C Location: 271344-271902 bp Feature: domain Description: INT_P4_C Location: 2 71344-2 71902 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT FimC (COG3121), FimD (COG3188), RVT-UG4, Integrase_1 (pfam12835), INT_P4_C (cd00801)