myRT

myRT report for GCA_900501415.1_18623_1_48

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Seq: UIUF01000019.1 Klebsiella pneumoniae strain EuSCAPE_GR097 genome assembly, contig: 18623_148SCcontig000019, whole genome shotgun sequence (59388 bp)
Overview 1 RT 1: 20871-28602 bp Neighborhood of RT #1 [20871, 28646] Peptidase_M78 IncA RVT-UG5 PRK04247 HsdS RMtype1_S_EcoKI-TRD1-CR1_like RMtype1_S_EcoKI-TRD1-CR1_like Feature: gene Location: 20871-21419 bp Feature: domain Description: Peptidase_M78 Location: 21024-21387 bp Feature: domain Description: Peptidase_M78 Location: 21 024-21 387 bp Feature: gene Location: 21419-22093 bp Feature: domain Description: IncA Location: 21710-22052 bp Feature: domain Description: IncA Location: 21 71 0-22052 bp Feature: gene Location: 22541-25558 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 23042-23528 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 23042-23528 bp Feature: gene Location: 25736-26836 bp Feature: domain Description: PRK04247 Location: 25796-26030 bp Feature: domain Description: PRK04247 Location: 25796-26030 bp Feature: gene Location: 26847-28646 bp Feature: domain Description: HsdS Location: 26853-27102 bp Feature: domain Description: HsdS Location: 26853-271 02 bp Feature: domain Description: RMtype1_S_EcoKI-TRD1-CR1_like Location: 27162-27726 bp Feature: domain Description: RMtype1 _S_EcoKI-TRD1 -CR1 _like Location: 271 62-27726 bp Feature: domain Description: RMtype1_S_EcoKI-TRD1-CR1_like Location: 28236-28602 bp Feature: domain Description: RMtype1 _S_EcoKI-TRD1 -CR1 _like Location: 28236-28602 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Peptidase_M78 (pfam06114), IncA, RVT-UG5, PRK04247 (endonuclease NucS), HsdS (COG0732), RMtype1_S_EcoKI-TRD1-CR1_like (cd17252)

Seq: UIUF01000042.1 Klebsiella pneumoniae strain EuSCAPE_GR097 genome assembly, contig: 18623_148SCcontig000042, whole genome shotgun sequence (250 bp)
Overview 1 RT 1: 3-246 bp Neighborhood of RT #1 [3, 248] RVT-GII Feature: gene Location: 3-248 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6-246 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6-2 46 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII