myRT

myRT report for GCA_900501435.1_18623_1_57

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Seq: UIUI01000011.1 Klebsiella pneumoniae strain EuSCAPE_GR113 genome assembly, contig: 18623_157SCcontig000011, whole genome shotgun sequence (172082 bp)
Overview 1 RT 1: 166768-169952 bp Neighborhood of RT #1 [166768, 169952] PRK10276 RVT-GII Feature: gene Location: 166768-167193 bp Feature: domain Description: PRK10276 Location: 166771-167179 bp Feature: domain Description: PRK1 0276 Location: 1 66771 -1 671 79 bp Feature: gene Location: 167311-167544 bp Feature: gene Location: 167595-169106 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 168000-168714 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 68000-1 6871 4 bp Feature: gene Location: 169340-169570 bp Feature: gene Location: 169629-169952 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII

Seq: UIUI01000005.1 Klebsiella pneumoniae strain EuSCAPE_GR113 genome assembly, contig: 18623_157SCcontig000005, whole genome shotgun sequence (439521 bp)
Overview 1 RT 1: 2-3307 bp Neighborhood of RT #1 [2, 3417] Lipase_GDSL_2 RVT-GII PRK10276 Feature: gene Location: 2-361 bp Feature: domain Description: Lipase_GDSL_2 Location: 14-293 bp Feature: domain Description: Lipase_GDSL_2 Location: 14-2 93 bp Feature: gene Location: 1373-2860 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1778-2468 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1778-2 468 bp Feature: gene Location: 2937-3176 bp Feature: gene Location: 3133-3417 bp Feature: domain Description: PRK10276 Location: 3178-3307 bp Feature: domain Description: PRK102 76 Location: 3178-3307 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Lipase_GDSL_2 (pfam13472), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit)

Seq: UIUI01000002.1 Klebsiella pneumoniae strain EuSCAPE_GR113 genome assembly, contig: 18623_157SCcontig000002, whole genome shotgun sequence (614112 bp)
Overview 1 RT 1: 31957-38810 bp Neighborhood of RT #1 [31957, 38827] INT_P4_C Integrase_1 RVT-UG4 FimD FimC Feature: gene Location: 31957-32622 bp Feature: domain Description: INT_P4_C Location: 32062-32620 bp Feature: domain Description: INT_P4_C Location: 3 2062-3 2620 bp Feature: gene Location: 32883-33323 bp Feature: domain Description: Integrase_1 Location: 32889-33105 bp Feature: domain Description: Integrase_1 Location: 3 2889-3 3 105 bp Feature: gene Location: 33380-35458 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 33788-34232 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 3 3 788-3 423 2 bp Feature: gene Location: 35458-38067 bp Feature: domain Description: FimD Location: 35515-38056 bp Feature: domain Description: FimD Location: 3 5515-3 8056 bp Feature: gene Location: 38099-38827 bp Feature: domain Description: FimC Location: 38147-38810 bp Feature: domain Description: FimC Location: 3 8147-3 8810 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT INT_P4_C (cd00801), Integrase_1 (pfam12835), RVT-UG4, FimD (COG3188), FimC (COG3121)