myRT

myRT report for GCA_900501835.1_18623_2_113

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Seq: UIVX01000029.1 Klebsiella pneumoniae strain EuSCAPE_PT052 genome assembly, contig: 18623_2113SCcontig000029, whole genome shotgun sequence (11396 bp)
Overview 1 RT 1: 2031-5301 bp Neighborhood of RT #1 [2031, 5315] RVT-GII PRK10276 Feature: gene Location: 2031-2246 bp Feature: gene Location: 2513-2743 bp Feature: gene Location: 2977-4488 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3382-4096 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3382-4096 bp Feature: gene Location: 4539-4772 bp Feature: gene Location: 4890-5315 bp Feature: domain Description: PRK10276 Location: 4893-5301 bp Feature: domain Description: PRK1 0276 Location: 4893-5301 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit)

Seq: UIVX01000007.1 Klebsiella pneumoniae strain EuSCAPE_PT052 genome assembly, contig: 18623_2113SCcontig000007, whole genome shotgun sequence (369923 bp)
Overview 1 RT 1: 330303-337171 bp Neighborhood of RT #1 [330303, 337173] FimC FimD RVT-UG4 Integrase_1 INT_P4_C Feature: gene Location: 330303-331031 bp Feature: domain Description: FimC Location: 330351-331014 bp Feature: domain Description: FimC Location: 330351-331014 bp Feature: gene Location: 331063-333672 bp Feature: domain Description: FimD Location: 331120-333661 bp Feature: domain Description: FimD Location: 33112 0-333661 bp Feature: gene Location: 333672-335750 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 334080-334524 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 334080-33452 4 bp Feature: gene Location: 335807-336247 bp Feature: domain Description: Integrase_1 Location: 335813-336029 bp Feature: domain Description: Integrase_1 Location: 335813-33602 9 bp Feature: gene Location: 336508-337173 bp Feature: domain Description: INT_P4_C Location: 336613-337171 bp Feature: domain Description: INT_P4_C Location: 336613-337171 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT FimC (COG3121), FimD (COG3188), RVT-UG4, Integrase_1 (pfam12835), INT_P4_C (cd00801)

Seq: UIVX01000005.1 Klebsiella pneumoniae strain EuSCAPE_PT052 genome assembly, contig: 18623_2113SCcontig000005, whole genome shotgun sequence (439521 bp)
Overview 1 RT 1: 2-3307 bp Neighborhood of RT #1 [2, 3417] Lipase_GDSL_2 RVT-GII PRK10276 Feature: gene Location: 2-361 bp Feature: domain Description: Lipase_GDSL_2 Location: 14-293 bp Feature: domain Description: Lipase_GDSL_2 Location: 14-293 bp Feature: gene Location: 1373-2860 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1778-2468 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1778-2468 bp Feature: gene Location: 2937-3176 bp Feature: gene Location: 3133-3417 bp Feature: domain Description: PRK10276 Location: 3178-3307 bp Feature: domain Description: PRK10276 Location: 3 178-3 3 07 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Lipase_GDSL_2 (pfam13472), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit)