myRT

myRT report for GCA_900502175.1_18623_2_153

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Seq: UIXH01000009.1 Klebsiella pneumoniae strain EuSCAPE_PT094 genome assembly, contig: 18623_2153SCcontig000009, whole genome shotgun sequence (321294 bp)
Overview 1 RT 1: 282468-289336 bp Neighborhood of RT #1 [282468, 289338] FimC FimD RVT-UG4 Integrase_1 INT_P4_C Feature: gene Location: 282468-283196 bp Feature: domain Description: FimC Location: 282516-283179 bp Feature: domain Description: FimC Location: 28251 6-2831 79 bp Feature: gene Location: 283228-285837 bp Feature: domain Description: FimD Location: 283285-285826 bp Feature: domain Description: FimD Location: 283285-285826 bp Feature: gene Location: 285837-287915 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 286245-286689 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 286245-286689 bp Feature: gene Location: 287972-288412 bp Feature: domain Description: Integrase_1 Location: 287978-288194 bp Feature: domain Description: Integrase_1 Location: 287978-2881 94 bp Feature: gene Location: 288673-289338 bp Feature: domain Description: INT_P4_C Location: 288778-289336 bp Feature: domain Description: INT_P4_C Location: 288778-289336 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT FimC (COG3121), FimD (COG3188), RVT-UG4, Integrase_1 (pfam12835), INT_P4_C (cd00801)

Seq: UIXH01000023.1 Klebsiella pneumoniae strain EuSCAPE_PT094 genome assembly, contig: 18623_2153SCcontig000023, whole genome shotgun sequence (23325 bp)
Overview 1 RT 1: 13960-17230 bp Neighborhood of RT #1 [13960, 17244] RVT-GII PRK10276 Feature: gene Location: 13960-14175 bp Feature: gene Location: 14442-14672 bp Feature: gene Location: 14906-16417 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 15311-16025 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 15311-1602 5 bp Feature: gene Location: 16468-16701 bp Feature: gene Location: 16819-17244 bp Feature: domain Description: PRK10276 Location: 16822-17230 bp Feature: domain Description: PRK102 76 Location: 1682 2 -172 30 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit)