myRT

myRT report for GCA_900502585.1_18623_2_64

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Seq: UIYW01000002.1 Klebsiella pneumoniae strain EuSCAPE_DK013 genome assembly, contig: 18623_264SCcontig000002, whole genome shotgun sequence (625315 bp)
Overview 1 RT 1: 466856-474508 bp Neighborhood of RT #1 [466856, 474508] DUF4917 AAA_15 RVT-Retrons Nuc_deoxyrib_tr Feature: gene Location: 466856-467875 bp Ori: SVU13486.1 Feature: domain Description: DUF4917 Location: 466916-467840 bp Feature: domain Description: DUF491 7 Location: 46691 6-467840 bp Feature: gene Location: 469274-471520 bp Ori: SVU13487.1 Feature: domain Description: AAA_15 Location: 469277-470285 bp Feature: domain Description: AAA_1 5 Location: 469277-470285 bp Feature: gene Location: 471635-472735 bp Ori: SVU13488.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 471815-472349 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 471 81 5-472349 bp Feature: gene Location: 473391-474260 bp Ori: SVU13489.1 Feature: domain Description: Nuc_deoxyrib_tr Location: 473913-474084 bp Feature: domain Description: Nuc_deoxyrib_tr Location: 47391 3-474084 bp Feature: gene Location: 474257-474508 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF4917 (pfam16263), AAA_15 (pfam13175), RVT-Retrons, Nuc_deoxyrib_tr (pfam05014)

Seq: UIYW01000007.1 Klebsiella pneumoniae strain EuSCAPE_DK013 genome assembly, contig: 18623_264SCcontig000007, whole genome shotgun sequence (295756 bp)
Overview 1 RT 1: 154725-157785 bp Neighborhood of RT #1 [154725, 157785] DinI RVT-Retrons Feature: gene Location: 154725-155165 bp Ori: SVU15634.1 Gene: dinI_2 Feature: domain Description: DinI Location: 154980-155163 bp Feature: domain Description: DinI Location: 154980-155163 bp Feature: gene Location: 155594-155749 bp Feature: gene Location: 156072-157022 bp Ori: SVU15637.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 156252-156795 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1562 52 -156795 bp Feature: gene Location: 157092-157451 bp Feature: gene Location: 157591-157785 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DinI (pfam06183), RVT-Retrons

Seq: UIYW01000005.1 Klebsiella pneumoniae strain EuSCAPE_DK013 genome assembly, contig: 18623_264SCcontig000005, whole genome shotgun sequence (391977 bp)
Overview 1 RT 1: 25-5416 bp Neighborhood of RT #1 [25, 5418] PRK10276 umuC RVT-UG11 PRK09951 PRK15110 Feature: gene Location: 25-531 bp Ori: SVU14404.1 Gene: umuD_1 Feature: domain Description: PRK10276 Location: 115-526 bp Feature: domain Description: PRK10276 Location: 115-526 bp Feature: gene Location: 533-1798 bp Ori: SVU14405.1 Gene: umuC_1 Feature: domain Description: umuC Location: 536-1796 bp Feature: domain Description: umuC Location: 53 6-1796 bp Feature: gene Location: 2471-3379 bp Ori: SVU14406.1 Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 2744-3200 bp Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 2744-3 200 bp Feature: gene Location: 3580-4248 bp Ori: SVU14407.1 Gene: yedK_1 Feature: domain Description: PRK09951 Location: 3583-4246 bp Feature: domain Description: PRK09951 Location: 3 583 -4246 bp Feature: gene Location: 4453-5418 bp Ori: SVU14408.1 Gene: sapB_1 Feature: domain Description: PRK15110 Location: 4456-5416 bp Feature: domain Description: PRK15110 Location: 4456-5416 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), umuC (PRK03609), RVT-UG11, PRK09951 (hypothetical protein; Provisional), PRK15110 (peptide ABC transporter permease SapB)

Seq: UIYW01000048.1 Klebsiella pneumoniae strain EuSCAPE_DK013 genome assembly, contig: 18623_264SCcontig000048, whole genome shotgun sequence (1895 bp)
Overview 1 RT 1: 62-1157 bp Neighborhood of RT #1 [62, 1549] RVT-GII Feature: gene Location: 62-1549 bp Ori: SVU20289.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 467-1157 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4 67-1157 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII