myRT

myRT report for GCA_900502775.1_18623_2_86

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Seq: UIZN01000008.1 Klebsiella pneumoniae strain EuSCAPE_PT019 genome assembly, contig: 18623_286SCcontig000008, whole genome shotgun sequence (321300 bp)
Overview 1 RT 1: 282474-289342 bp Neighborhood of RT #1 [282474, 289344] FimC FimD RVT-UG4 Integrase_1 INT_P4_C Feature: gene Location: 282474-283202 bp Feature: domain Description: FimC Location: 282522-283185 bp Feature: domain Description: FimC Location: 282522-2831 85 bp Feature: gene Location: 283234-285843 bp Feature: domain Description: FimD Location: 283291-285832 bp Feature: domain Description: FimD Location: 283291 -285832 bp Feature: gene Location: 285843-287921 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 286251-286695 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 286251 -286695 bp Feature: gene Location: 287978-288418 bp Feature: domain Description: Integrase_1 Location: 287984-288200 bp Feature: domain Description: Integrase_1 Location: 287984-288200 bp Feature: gene Location: 288679-289344 bp Feature: domain Description: INT_P4_C Location: 288784-289342 bp Feature: domain Description: INT_P4_C Location: 288784-289342 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT FimC (COG3121), FimD (COG3188), RVT-UG4, Integrase_1 (pfam12835), INT_P4_C (cd00801)

Seq: UIZN01000027.1 Klebsiella pneumoniae strain EuSCAPE_PT019 genome assembly, contig: 18623_286SCcontig000027, whole genome shotgun sequence (16701 bp)
Overview 1 RT 1: 7336-10606 bp Neighborhood of RT #1 [7336, 10620] RVT-GII PRK10276 Feature: gene Location: 7336-7551 bp Feature: gene Location: 7818-8048 bp Feature: gene Location: 8282-9793 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8687-9401 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8687-9401 bp Feature: gene Location: 9844-10077 bp Feature: gene Location: 10195-10620 bp Feature: domain Description: PRK10276 Location: 10198-10606 bp Feature: domain Description: PRK102 76 Location: 10198-10606 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit)