myRT

myRT report for GCA_900503045.1_18858_1_129

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Seq: UJAQ01000008.1 Klebsiella pneumoniae strain EuSCAPE_SI015 genome assembly, contig: 18858_1129SCcontig000008, whole genome shotgun sequence (366368 bp)
Overview 1 RT 1: 256070-262938 bp Neighborhood of RT #1 [256070, 262940] FimC FimD RVT-UG4 Integrase_1 INT_P4_C Feature: gene Location: 256070-256798 bp Feature: domain Description: FimC Location: 256118-256781 bp Feature: domain Description: FimC Location: 2561 1 8-256781 bp Feature: gene Location: 256830-259439 bp Feature: domain Description: FimD Location: 256887-259428 bp Feature: domain Description: FimD Location: 256887-259428 bp Feature: gene Location: 259439-261517 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 259850-260291 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 259850-260291 bp Feature: gene Location: 261574-262014 bp Feature: domain Description: Integrase_1 Location: 261580-261796 bp Feature: domain Description: Integrase_1 Location: 261 580-261 796 bp Feature: gene Location: 262275-262940 bp Feature: domain Description: INT_P4_C Location: 262380-262938 bp Feature: domain Description: INT_P4_C Location: 262380-262938 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT FimC (COG3121), FimD (COG3188), RVT-UG4, Integrase_1 (pfam12835), INT_P4_C (cd00801)

Seq: UJAQ01000016.1 Klebsiella pneumoniae strain EuSCAPE_SI015 genome assembly, contig: 18858_1129SCcontig000016, whole genome shotgun sequence (38204 bp)
Overview 1 RT 1: 30598-36073 bp Neighborhood of RT #1 [30598, 36078] Plasmid_stab_B Plasmid_stab_B StbA RVT-GII PRK10276 umuC Feature: gene Location: 30598-31269 bp Feature: domain Description: Plasmid_stab_B Location: 30613-30820 bp Feature: domain Description: Plasmid_stab_B Location: 30613-3082 0 bp Feature: domain Description: Plasmid_stab_B Location: 30925-31132 bp Feature: domain Description: Plasmid_stab_B Location: 3092 5-31132 bp Feature: gene Location: 31272-32243 bp Feature: domain Description: StbA Location: 31275-32220 bp Feature: domain Description: StbA Location: 312 75-32 2 2 0 bp Feature: gene Location: 32492-33979 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 32897-33587 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 32 897-33587 bp Feature: gene Location: 34133-34807 bp Feature: domain Description: PRK10276 Location: 34385-34793 bp Feature: domain Description: PRK102 76 Location: 34385-34793 bp Feature: gene Location: 34807-36078 bp Feature: domain Description: umuC Location: 34810-36073 bp Feature: domain Description: umuC Location: 34810-36073 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Plasmid_stab_B (pfam10784), StbA (pfam06406), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), umuC (PRK03609)