myRT

myRT report for GCA_900505735.1_19084_4_33

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Seq: UJLF01000008.1 Klebsiella pneumoniae strain EuSCAPE_HR014 genome assembly, contig: 19084_433SCcontig000008, whole genome shotgun sequence (247765 bp)
Overview 1 RT 1: 203142-209986 bp Neighborhood of RT #1 [203142, 210243] AAA_15 RVT-Retrons Nuc_deoxyrib_tr HTH_23 Feature: gene Location: 203142-203447 bp Feature: gene Location: 204330-206606 bp Feature: domain Description: AAA_15 Location: 204363-205371 bp Feature: domain Description: AAA_1 5 Location: 204363-205371 bp Feature: gene Location: 206721-207821 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 206904-207432 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 206904-207432 bp Feature: gene Location: 208477-209346 bp Feature: domain Description: Nuc_deoxyrib_tr Location: 208999-209170 bp Feature: domain Description: Nuc_deoxyrib_tr Location: 208999-2091 70 bp Feature: gene Location: 209767-210243 bp Feature: domain Description: HTH_23 Location: 209845-209986 bp Feature: domain Description: HTH_23 Location: 209845-209986 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AAA_15 (pfam13175), RVT-Retrons, Nuc_deoxyrib_tr (pfam05014), HTH_23 (pfam13384)

Seq: UJLF01000032.1 Klebsiella pneumoniae strain EuSCAPE_HR014 genome assembly, contig: 19084_433SCcontig000032, whole genome shotgun sequence (8916 bp)
Overview 1 RT 1: 5171-8374 bp Neighborhood of RT #1 [5171, 8766] umuC PRK10276 RVT-GII Feature: gene Location: 5171-6442 bp Feature: domain Description: umuC Location: 5174-6434 bp Feature: domain Description: umuC Location: 5174-6434 bp Feature: gene Location: 6442-7254 bp Feature: domain Description: PRK10276 Location: 6874-7237 bp Feature: domain Description: PRK102 76 Location: 6874-72 37 bp Feature: gene Location: 7279-8766 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7684-8374 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7684-8374 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII