myRT

myRT report for GCA_900506505.1_19506_1_148

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Seq: UJOP01000020.1 Klebsiella pneumoniae strain EuSCAPE_BE011 genome assembly, contig: 19506_1148SCcontig000020, whole genome shotgun sequence (58507 bp)
Overview 1 RT 1: 49016-52286 bp Neighborhood of RT #1 [49016, 52300] RVT-GII PRK10276 Feature: gene Location: 49016-49231 bp Feature: gene Location: 49498-49728 bp Feature: gene Location: 49962-51473 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 50367-51081 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 50367-51 081 bp Feature: gene Location: 51524-51757 bp Feature: gene Location: 51875-52300 bp Feature: domain Description: PRK10276 Location: 51878-52286 bp Feature: domain Description: PRK1 0276 Location: 51 878-52286 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit)

Seq: UJOP01000013.1 Klebsiella pneumoniae strain EuSCAPE_BE011 genome assembly, contig: 19506_1148SCcontig000013, whole genome shotgun sequence (117182 bp)
Overview 1 RT 1: 45799-52652 bp Neighborhood of RT #1 [45799, 52669] INT_P4_C Integrase_1 RVT-UG4 FimD FimC Feature: gene Location: 45799-46464 bp Feature: domain Description: INT_P4_C Location: 45904-46462 bp Feature: domain Description: INT_P4_C Location: 45904-46462 bp Feature: gene Location: 46725-47165 bp Feature: domain Description: Integrase_1 Location: 46731-46947 bp Feature: domain Description: Integrase_1 Location: 46731-46947 bp Feature: gene Location: 47222-49300 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 47630-48074 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 47630-48074 bp Feature: gene Location: 49300-51909 bp Feature: domain Description: FimD Location: 49357-51898 bp Feature: domain Description: FimD Location: 49357-51898 bp Feature: gene Location: 51941-52669 bp Feature: domain Description: FimC Location: 51974-52652 bp Feature: domain Description: FimC Location: 51974-52 652 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT INT_P4_C (cd00801), Integrase_1 (pfam12835), RVT-UG4, FimD (COG3188), FimC (COG3121)