myRT

myRT report for GCA_900506545.1_19506_1_147

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Seq: UJOA01000021.1 Klebsiella pneumoniae strain EuSCAPE_BE010 genome assembly, contig: 19506_1147SCcontig000021, whole genome shotgun sequence (58507 bp)
Overview 1 RT 1: 49016-52286 bp Neighborhood of RT #1 [49016, 52300] RVT-GII PRK10276 Feature: gene Location: 49016-49231 bp Feature: gene Location: 49498-49728 bp Feature: gene Location: 49962-51473 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 50367-51081 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 50367-51 081 bp Feature: gene Location: 51524-51757 bp Feature: gene Location: 51875-52300 bp Feature: domain Description: PRK10276 Location: 51878-52286 bp Feature: domain Description: PRK1 0276 Location: 51 878-52286 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit)

Seq: UJOA01000012.1 Klebsiella pneumoniae strain EuSCAPE_BE010 genome assembly, contig: 19506_1147SCcontig000012, whole genome shotgun sequence (117272 bp)
Overview 1 RT 1: 45889-52742 bp Neighborhood of RT #1 [45889, 52759] INT_P4_C Integrase_1 RVT-UG4 FimD FimC Feature: gene Location: 45889-46554 bp Feature: domain Description: INT_P4_C Location: 45994-46552 bp Feature: domain Description: INT_P4_C Location: 45994-46552 bp Feature: gene Location: 46815-47255 bp Feature: domain Description: Integrase_1 Location: 46821-47037 bp Feature: domain Description: Integrase_1 Location: 4682 1-47037 bp Feature: gene Location: 47312-49390 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 47720-48164 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 4772 0-48164 bp Feature: gene Location: 49390-51999 bp Feature: domain Description: FimD Location: 49447-51988 bp Feature: domain Description: FimD Location: 49447-51988 bp Feature: gene Location: 52031-52759 bp Feature: domain Description: FimC Location: 52064-52742 bp Feature: domain Description: FimC Location: 52 064-52 742 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT INT_P4_C (cd00801), Integrase_1 (pfam12835), RVT-UG4, FimD (COG3188), FimC (COG3121)