myRT

myRT report for GCA_900506585.1_19506_1_156

Download annotations/find similar RTs

Seq: UJOD01000008.1 Klebsiella pneumoniae strain EuSCAPE_BE019 genome assembly, contig: 19506_1156SCcontig000008, whole genome shotgun sequence (274040 bp)
Overview 1 RT 1: 221511-228379 bp Neighborhood of RT #1 [221511, 228381] FimC FimD RVT-UG4 Integrase_1 INT_P4_C Feature: gene Location: 221511-222239 bp Feature: domain Description: FimC Location: 221544-222222 bp Feature: domain Description: FimC Location: 221 544-222222 bp Feature: gene Location: 222271-224880 bp Feature: domain Description: FimD Location: 222328-224869 bp Feature: domain Description: FimD Location: 222328-224869 bp Feature: gene Location: 224880-226958 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 225288-225732 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 225288-225732 bp Feature: gene Location: 227015-227455 bp Feature: domain Description: Integrase_1 Location: 227021-227237 bp Feature: domain Description: Integrase_1 Location: 227021 -227237 bp Feature: gene Location: 227716-228381 bp Feature: domain Description: INT_P4_C Location: 227821-228379 bp Feature: domain Description: INT_P4_C Location: 227821 -228379 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT FimC (COG3121), FimD (COG3188), RVT-UG4, Integrase_1 (pfam12835), INT_P4_C (cd00801)

Seq: UJOD01000029.1 Klebsiella pneumoniae strain EuSCAPE_BE019 genome assembly, contig: 19506_1156SCcontig000029, whole genome shotgun sequence (25716 bp)
Overview 1 RT 1: 19378-23185 bp Neighborhood of RT #1 [19378, 23205] INT_Cre_C RVT-GII HHA Feature: gene Location: 19378-19695 bp Feature: gene Location: 19761-20897 bp Feature: domain Description: INT_Cre_C Location: 20184-20838 bp Feature: domain Description: INT_Cre_C Location: 2 0184-2 0838 bp Feature: gene Location: 21104-22447 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 21485-22016 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 1485-2 2 016 bp Feature: gene Location: 22475-22864 bp Feature: gene Location: 22954-23205 bp Feature: domain Description: HHA Location: 23002-23185 bp Feature: domain Description: HHA Location: 2 3002 -2 3185 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT INT_Cre_C (cd00799), RVT-GII, HHA (pfam05321)

Seq: UJOD01000021.1 Klebsiella pneumoniae strain EuSCAPE_BE019 genome assembly, contig: 19506_1156SCcontig000021, whole genome shotgun sequence (58507 bp)
Overview 1 RT 1: 49016-52286 bp Neighborhood of RT #1 [49016, 52300] RVT-GII PRK10276 Feature: gene Location: 49016-49231 bp Feature: gene Location: 49498-49728 bp Feature: gene Location: 49962-51473 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 50367-51081 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 503 67-51081 bp Feature: gene Location: 51524-51757 bp Feature: gene Location: 51875-52300 bp Feature: domain Description: PRK10276 Location: 51878-52286 bp Feature: domain Description: PRK10276 Location: 51878-52286 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit)